• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

超快酸离解和酸碱中和反应的计算研究。II. 溶剂分子配位状态与协同和顺序酸离解的关系。

A computational study of ultrafast acid dissociation and acid-base neutralization reactions. II. The relationship between the coordination state of solvent molecules and concerted versus sequential acid dissociation.

机构信息

Département de Chimie, Université de Montréal, CP 6128, succursale Centre-Ville, Montréal, H3C3J7, Canada.

出版信息

J Chem Phys. 2011 Mar 7;134(9):094505. doi: 10.1063/1.3554654.

DOI:10.1063/1.3554654
PMID:21384983
Abstract

We investigate the role played by the coordination state of pre-existing water wires during the dissociation of moderately strong acids by means of first-principles molecular dynamics calculations. By preparing 2,4,6-tricyanophenol (calc. pKa∼0.5) in two different initial states, we are able to observe sequential as well as concerted trajectories of dissociation: On one hand, equilibrium dissociation takes place on a ∼50 ps timescale; proton conduction occurs through three-coordinated water wires in this case, by means of sequential Grotthus hopping. On the other hand, by preparing 2,4,6-tricyanophenol in a hydration state inherited from that of equilibrated phenol (calc. pKa=7.6), the moderately strong acid finds itself in a presolvated state from which dissociation can take place on a ∼1 ps timescale. In this case, concerted dissociation trajectories are observed, which consist of proton translocation through two intervening, four-coordinated, water molecules in 0.1-1.0 ps. The present results suggest that, in general, the mechanism of proton translocation depends on how the excess proton is injected into a hydrogen bond network. In particular, if the initial conditions favour proton release to a fourfold H-bonded water molecule, proton translocation by as much as 6-8 Å can take place on a sub-picosecond timescale.

摘要

我们通过第一性原理分子动力学计算研究了在中等强度酸解离过程中预先存在的水键配位状态所起的作用。通过将 2,4,6-三氰基苯酚(计算的 pKa∼0.5)制备在两种不同的初始状态下,我们能够观察到顺序和协同解离轨迹:一方面,平衡解离在 ∼50 ps 的时间尺度上发生;在这种情况下,质子通过三配位水键通过连续的 Grotthus 跳跃进行传导。另一方面,通过将 2,4,6-三氰基苯酚制备在从平衡苯酚(计算的 pKa=7.6)继承的水合状态下,中等强度酸处于预溶剂化状态,从该状态可以在 ∼1 ps 的时间尺度上发生解离。在这种情况下,观察到协同解离轨迹,其中质子通过 0.1-1.0 ps 内的两个中间的四配位水分子进行迁移。本研究结果表明,一般来说,质子迁移的机制取决于多余质子如何注入氢键网络。特别是,如果初始条件有利于质子释放到四配位的水分子上,则质子可以在亚皮秒时间尺度上迁移高达 6-8 Å。

相似文献

1
A computational study of ultrafast acid dissociation and acid-base neutralization reactions. II. The relationship between the coordination state of solvent molecules and concerted versus sequential acid dissociation.超快酸离解和酸碱中和反应的计算研究。II. 溶剂分子配位状态与协同和顺序酸离解的关系。
J Chem Phys. 2011 Mar 7;134(9):094505. doi: 10.1063/1.3554654.
2
The effect of hydrogen bonding on the excited-state proton transfer in 2-(2'-hydroxyphenyl)benzothiazole: a TDDFT molecular dynamics study.氢键对 2-(2'-羟基苯基)苯并噻唑激发态质子转移的影响:TDDFT 分子动力学研究。
Phys Chem Chem Phys. 2012 Jul 7;14(25):9016-25. doi: 10.1039/c2cp23905a. Epub 2012 Apr 12.
3
Excited-state proton transfer through water bridges and structure of hydrogen-bonded complexes in 1H-pyrrolo[3,2-h]quinoline: adiabatic time-dependent density functional theory study.通过水桥的激发态质子转移及1H-吡咯并[3,2-h]喹啉中氢键复合物的结构:绝热含时密度泛函理论研究
J Phys Chem A. 2006 Nov 2;110(43):11958-67. doi: 10.1021/jp063426u.
4
An ab initio quantum mechanical charge field molecular dynamics simulation of a dilute aqueous HCl solution.稀盐酸水溶液的从头算量子力学电荷场分子动力学模拟。
J Comput Chem. 2010 Jun;31(8):1785-92. doi: 10.1002/jcc.21469.
5
Structure and dynamics of a proton wire: a theoretical study of H+ translocation along the single-file water chain in the gramicidin A channel.质子线的结构与动力学:关于氢离子沿短杆菌肽A通道中单行水链转运的理论研究
Biophys J. 1996 Jul;71(1):19-39. doi: 10.1016/S0006-3495(96)79211-1.
6
A computational study of ultrafast acid dissociation and acid-base neutralization reactions. I. The model.超快酸离解和酸碱中和反应的计算研究。I. 模型。
J Chem Phys. 2010 Jul 28;133(4):044108. doi: 10.1063/1.3461162.
7
Hydrogen transfer and hydration properties of H(n)PO4(3-n) (n=0-3) in water studied by first principles molecular dynamics simulations.基于第一性原理分子动力学模拟研究水中H(n)PO4(3 - n)(n = 0 - 3)的氢转移和水合性质
J Chem Phys. 2009 Jun 21;130(23):234502. doi: 10.1063/1.3143952.
8
Combining ab initio quantum mechanics with a dipole-field model to describe acid dissociation reactions in water: first-principles free energy and entropy calculations.运用从头算量子力学和偶极场模型来描述水中的酸离解反应:第一性原理自由能和熵的计算。
J Chem Phys. 2010 Feb 21;132(7):074112. doi: 10.1063/1.3317398.
9
Picosecond IR-UV pump-probe spectroscopic study of the dynamics of the vibrational relaxation of jet-cooled phenol. II. Intracluster vibrational energy redistribution of the OH stretching vibration of hydrogen-bonded clusters.喷射冷却苯酚振动弛豫动力学的皮秒红外-紫外泵浦-探测光谱研究。II. 氢键簇OH伸缩振动的簇内振动能量重新分布
J Chem Phys. 2004 Apr 22;120(16):7410-7. doi: 10.1063/1.1668641.
10
A first principles molecular dynamics study of the solvation structure and migration kinetics of an excess proton and a hydroxide ion in binary water-ammonia mixtures.第一原理分子动力学研究过剩质子和氢氧根离子在二元水-氨混合物中的溶剂化结构和迁移动力学。
J Chem Phys. 2012 Mar 21;136(11):114509. doi: 10.1063/1.3691602.

引用本文的文献

1
Protons and Hydroxide Ions in Aqueous Systems.水体系中的质子和氢氧根离子。
Chem Rev. 2016 Jul 13;116(13):7642-72. doi: 10.1021/acs.chemrev.5b00736. Epub 2016 Jun 17.
2
Single-file water in nanopores.单分子层水在纳米孔中。
Phys Chem Chem Phys. 2011 Sep 14;13(34):15403-17. doi: 10.1039/c1cp21086f. Epub 2011 Jul 21.
3
Energetics and dynamics of proton transfer reactions along short water wires.质子转移反应沿短水线的能量学和动力学。
Phys Chem Chem Phys. 2011 Aug 7;13(29):13207-15. doi: 10.1039/c1cp21112a. Epub 2011 Jun 23.