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普通菜豆细菌性疫病细菌与抗病数量性状基因座的相互作用。

Interaction of common bacterial blight bacteria with disease resistance quantitative trait loci in common bean.

机构信息

Department of Plant Pathology, University of California, Davis, One Shields Ave., Davis 95616, CA, USA.

出版信息

Phytopathology. 2011 Apr;101(4):425-35. doi: 10.1094/PHYTO-03-10-0095.

Abstract

Common bacterial blight (CBB) of common bean (Phaseolus vulgaris L.) is caused by Xanthomonas campestris pv. phaseoli and X. fuscans subsp. fuscans, and is the most important bacterial disease of this crop in many regions of the world. In 2005 and 2006, dark red kidney bean fields in a major bean-growing region in central Wisconsin were surveyed for CBB incidence and representative symptomatic leaves collected. Xanthomonad-like bacteria were isolated from these leaves and characterized based upon phenotypic (colony) characteristics, pathogenicity on common bean, polymerase chain reaction (PCR) with X. campestris pv. phaseoli- and X. fuscans subsp. fuscans-specific primers, and repetitive-element PCR (rep-PCR) and 16S-28S ribosomal RNA spacer region sequence analyses. Of 348 isolates that were characterized, 293 were identified as common blight bacteria (i.e., pathogenic on common bean and positive in PCR tests with the X. campestris pv. phaseoli- and X. fuscans subsp. fuscans-specific primers), whereas the other isolates were nonpathogenic xanthomonads. Most (98%) of the pathogenic xanthomonads were X. campestris pv. phaseoli, consistent with the association of this bacterium with CBB in large-seeded bean cultivars of the Andean gene pool. Two types of X. campestris pv. phaseoli were involved with CBB in this region: typical X. campestris pv. phaseoli (P) isolates with yellow mucoid colonies, no brown pigment production, and a typical X. campestris pv. phaseoli rep-PCR fingerprint (60% of strains); and a new phenotype and genotype (Px) with an X. campestris pv. phaseoli-type fingerprint and less mucoid colonies that produced brown pigment (40% of strains). In addition, a small number of X. fuscans subsp. fuscans strains, representing a new genotype (FH), were isolated from two fields in 2005. Representative P and Px X. campestris pv. phaseoli strains, an FH X. fuscans subsp. fuscans strain, plus five previously characterized X. campestris pv. phaseoli and X. fuscans subsp. fuscans genotypes were inoculated onto 28 common bean genotypes having various combinations of known CBB resistance quantitative trait loci (QTL) and associated sequence-characterized amplified region markers. Different levels of virulence were observed for X. campestris pv. phaseoli strains, whereas X. fuscans subsp. fuscans strains were similar in virulence. The typical X. campestris pv. phaseoli strain from Wisconsin was most virulent, whereas X. campestris pv. phaseoli genotypes from East Africa were the least virulent. Host genotypes having the SU91 marker-associated resistance and one or more other QTL (i.e., pyramided resistance), such as the VAX lines, were highly resistant to all genotypes of common blight bacteria tested. This information will help in the development of CBB resistance-breeding strategies for different common bean market classes in different geographical regions, as well as the identification of appropriate pathogen genotypes for screening for resistance.

摘要

普通菜豆细菌性疫病(CBB)由野油菜黄单胞菌菜豆致病变种(Xanthomonas campestris pv. phaseoli)和野油菜黄单胞菌褐致病变种(X. fuscans subsp. fuscans)引起,是世界许多地区该作物最重要的细菌性病害。2005 年和 2006 年,威斯康星州中部一个主要的菜豆种植区的深红色肾形菜豆田进行了 CBB 发病率调查,并采集了有代表性的病叶。从这些叶片中分离出黄单胞菌样细菌,并根据表型(菌落)特征、对普通菜豆的致病性、X. campestris pv. phaseoli 和 X. fuscans subsp. fuscans 特异性引物的聚合酶链反应(PCR)、重复元件 PCR(rep-PCR)和 16S-28S 核糖体 RNA 间隔区序列分析进行了鉴定。在 348 个被鉴定的分离株中,有 293 个被鉴定为普通疫病细菌(即对普通菜豆具有致病性,且在 X. campestris pv. phaseoli 和 X. fuscans subsp. fuscans 特异性引物的 PCR 检测中呈阳性),而其他分离株则是非致病性的黄单胞菌。大多数(98%)致病性黄单胞菌为野油菜黄单胞菌菜豆致病变种,与该菌与安第斯基因库大粒菜豆品种的 CBB 有关。该地区 CBB 涉及两种野油菜黄单胞菌菜豆致病变种:典型的野油菜黄单胞菌菜豆致病变种(P)分离株具有黄色粘液状菌落,无棕色色素产生,以及典型的野油菜黄单胞菌菜豆致病变种 rep-PCR 指纹图谱(60%的菌株);以及一种新的表型和基因型(Px),具有野油菜黄单胞菌菜豆致病变种型指纹图谱和较少粘液状菌落,可产生棕色色素(40%的菌株)。此外,2005 年从两个田间还分离到少量野油菜黄单胞菌褐致病变种(X. fuscans subsp. fuscans)菌株,代表一种新的基因型(FH)。代表性的 P 和 Px 野油菜黄单胞菌菜豆致病变种、一个 FH 野油菜黄单胞菌褐致病变种菌株,以及之前鉴定的五个野油菜黄单胞菌菜豆致病变种和野油菜黄单胞菌褐致病变种基因型,被接种到 28 个具有不同已知 CBB 抗性数量性状基因座(QTL)和相关序列特征扩增区域标记的普通菜豆基因型上。观察到 X. campestris pv. phaseoli 菌株的毒力水平不同,而 X. fuscans subsp. fuscans 菌株的毒力相似。来自威斯康星州的典型野油菜黄单胞菌菜豆致病变种最为毒力,而来自东非的野油菜黄单胞菌菜豆致病变种基因型的毒力最低。具有 SU91 标记相关抗性和一个或多个其他 QTL(即,多基因抗性)的宿主基因型,如 VAX 系,对所有测试的普通疫病细菌基因型均具有高度抗性。这些信息将有助于为不同地理区域的不同普通菜豆市场类别制定 CBB 抗性育种策略,并为抗性筛选鉴定合适的病原菌基因型。

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