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基因复制导致新的上位性相互作用的增长。

Growth of novel epistatic interactions by gene duplication.

机构信息

Division of Nutritional Sciences, Cornell University, Ithaca, New York, USA.

出版信息

Genome Biol Evol. 2011;3:295-301. doi: 10.1093/gbe/evr016. Epub 2011 Mar 14.

DOI:10.1093/gbe/evr016
PMID:21402864
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3274824/
Abstract

Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Gene duplication is a major mechanism of evolution for genetic novelties. Here, we demonstrate that genes evolved significantly more epistatic interactions after duplication. The connectivity of duplicate gene pairs in epistatic networks is positively correlated with the extent of their sequence divergence. Furthermore, duplicate gene pairs tend to epistatically interact with genes that occupy more functional spaces than do single-copy genes. These results show that gene duplication plays an important role in the evolution of epistasis.

摘要

上位性作用长期以来一直被认为是理解生物系统的结构、功能和进化动态的基础。基因复制是遗传创新的主要进化机制。在这里,我们证明了基因在复制后会产生更多的上位性相互作用。在上位性网络中,重复基因对的连接性与它们序列差异的程度呈正相关。此外,重复基因对倾向于与占据更多功能空间的基因发生上位性相互作用,而不是单拷贝基因。这些结果表明,基因复制在上位性进化中起着重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/d100d3fa5025/gbeevr016f05_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/c4d37adb1fb6/gbeevr016f01_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/97713cf0fdd7/gbeevr016f02_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/2572c72d154c/gbeevr016f03_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/bd435bd47069/gbeevr016f04_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/d100d3fa5025/gbeevr016f05_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/c4d37adb1fb6/gbeevr016f01_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/97713cf0fdd7/gbeevr016f02_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/2572c72d154c/gbeevr016f03_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/bd435bd47069/gbeevr016f04_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5cf/3274824/d100d3fa5025/gbeevr016f05_lw.jpg

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本文引用的文献

1
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Mol Syst Biol. 2010 Nov 16;6:429. doi: 10.1038/msb.2010.82.
2
The cellular robustness by genetic redundancy in budding yeast.酿酒酵母中遗传冗余的细胞鲁棒性。
PLoS Genet. 2010 Nov 4;6(11):e1001187. doi: 10.1371/journal.pgen.1001187.
3
A de novo originated gene depresses budding yeast mating pathway and is repressed by the protein encoded by its antisense strand.一个从头起源的基因抑制出芽酵母交配途径,并被其反义链编码的蛋白质所抑制。
全基因组和小规模重复在酿酒酵母基因功能特化中的作用。
PLoS Genet. 2013;9(1):e1003176. doi: 10.1371/journal.pgen.1003176. Epub 2013 Jan 3.
4
Genetic basis of unstable expression of high gamma-tocopherol content in sunflower seeds.向日葵种子中高γ-生育酚含量不稳定表达的遗传基础。
BMC Plant Biol. 2012 May 18;12:71. doi: 10.1186/1471-2229-12-71.
5
Differences in the number of intrinsically disordered regions between yeast duplicated proteins, and their relationship with functional divergence.酵母重复蛋白中无规则区域数量的差异,及其与功能分歧的关系。
PLoS One. 2011;6(9):e24989. doi: 10.1371/journal.pone.0024989. Epub 2011 Sep 15.
Cell Res. 2010 Apr;20(4):408-20. doi: 10.1038/cr.2010.31. Epub 2010 Mar 2.
4
Evolution of plant RNA polymerase IV/V genes: evidence of subneofunctionalization of duplicated NRPD2/NRPE2-like paralogs in Viola (Violaceae).植物 RNA 聚合酶 IV/V 基因的进化:堇菜属(堇菜科)中重复的 NRPD2/NRPE2 样基因座亚功能化的证据。
BMC Evol Biol. 2010 Feb 16;10:45. doi: 10.1186/1471-2148-10-45.
5
The genetic landscape of a cell.细胞的基因图谱。
Science. 2010 Jan 22;327(5964):425-31. doi: 10.1126/science.1180823.
6
The evolution of gene duplications: classifying and distinguishing between models.基因重复的进化:模型的分类与区分。
Nat Rev Genet. 2010 Feb;11(2):97-108. doi: 10.1038/nrg2689. Epub 2010 Jan 6.
7
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Annu Rev Genet. 2009;43:601-25. doi: 10.1146/annurev.genet.39.073003.114751.
8
Fault tolerance in protein interaction networks: stable bipartite subgraphs and redundant pathways.蛋白质相互作用网络中的容错性:稳定二分图子图和冗余通路。
PLoS One. 2009;4(4):e5364. doi: 10.1371/journal.pone.0005364. Epub 2009 Apr 28.
9
Turning a hobby into a job: how duplicated genes find new functions.将爱好转变为工作:重复基因如何找到新功能。
Nat Rev Genet. 2008 Dec;9(12):938-50. doi: 10.1038/nrg2482.
10
Unravelling the evolutionary advantage of sex: a commentary on 'Mutation-selection balance and the evolutionary advantage of sex and recombination' by Brian Charlesworth.解读有性生殖的进化优势:对布莱恩·查尔斯沃思所著《突变-选择平衡与有性生殖和重组的进化优势》的评论
Genet Res. 2007 Dec;89(5-6):447-9. doi: 10.1017/S001667230800966X.