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全基因组上位性互作揭示生长性状的遗传结构。

Genetic architecture of growth traits revealed by global epistatic interactions.

出版信息

Genome Biol Evol. 2011;3:909-14. doi: 10.1093/gbe/evr065. Epub 2011 Aug 22.

Abstract

Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Yet, little is known about how it is distributed underlying specific traits. Based on a global map of epistatic interactions in baker's yeast, Saccharomyces cerevisiae, we show that epistasis is prevalent (∼13% increase from random expectation) and displays modular architecture among genes that underlie the same growth traits. More interestingly, our results indicate that hub genes responsible for the same growth traits tend to link epistatically with each other more frequently than random expectation. Our results provide a genome-wide perspective on the genetic architecture of growth traits in a eukaryotic organism.

摘要

上位性在理解生物系统的结构、功能和进化动态方面一直被认为是至关重要的。然而,关于它在特定性状下是如何分布的,我们知之甚少。基于酿酒酵母(Saccharomyces cerevisiae)中上位性相互作用的全球图谱,我们表明上位性是普遍存在的(比随机预期增加了约 13%),并且在基因之间呈现出模块结构,这些基因是相同生长性状的基础。更有趣的是,我们的结果表明,负责相同生长性状的枢纽基因彼此之间相互作用的频率比随机预期更高。我们的结果为真核生物生长性状的遗传结构提供了一个全基因组的视角。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1749/3177326/f4f96ddaf146/gbeevr065f01_3c.jpg

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