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在精确的量子化学计算中扩展分子尺寸:尿嘧啶的平衡结构和光谱性质。

Extending the molecular size in accurate quantum-chemical calculations: the equilibrium structure and spectroscopic properties of uracil.

机构信息

Dipartimento di Chimica G. Ciamician, Università di Bologna, Via F. Selmi 2, 40126 Bologna, Italy.

出版信息

Phys Chem Chem Phys. 2011 Apr 21;13(15):7189-97. doi: 10.1039/c0cp02636k. Epub 2011 Mar 16.

Abstract

The equilibrium structure of uracil has been investigated using both theoretical and experimental data. With respect to the former, quantum-chemical calculations at the coupled-cluster level in conjunction with a triple-zeta basis set have been carried out. Extrapolation to the basis set limit, performed employing the second-order Møller-Plesset perturbation theory, and inclusion of core-correlation and diffuse-function corrections have also been considered. Based on the available rotational constants for various isotopic species together with corresponding computed vibrational corrections, the semi-experimental equilibrium structure of uracil has been determined for the first time. Theoretical and semi-experimental structures have been found in remarkably good agreement, thus pointing out the limitations of previous experimental determinations. Molecular and spectroscopic properties of uracil have then been studied by means of the composite computational approach introduced for the molecular structure evaluation. Among the results achieved, we mention the revision of the dipole moment. On the whole, it has been proved that the computational procedure presented is able to provide parameters with the proper accuracy to support experimental investigations of large molecules of biological interest.

摘要

已使用理论和实验数据研究了尿嘧啶的平衡结构。就前者而言,已进行了结合三重 zeta 基组的耦合簇水平的量子化学计算。通过使用二阶 Møller-Plesset 微扰理论进行基组极限外推,并考虑了核心相关和弥散函数校正,也对其进行了考虑。基于各种同位素物种的可用旋转常数以及相应的计算振动校正,首次确定了尿嘧啶的半实验平衡结构。理论和半实验结构之间存在着非常好的一致性,从而指出了先前实验测定的局限性。通过为分子结构评估引入的组合计算方法,研究了尿嘧啶的分子和光谱性质。在取得的结果中,我们提到了偶极矩的修订。总的来说,已经证明,所提出的计算程序能够提供具有适当精度的参数,以支持对具有生物学意义的大型分子的实验研究。

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