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家族 1 糖基转移酶功能多样性的进化观点。

An evolutionary view of functional diversity in family 1 glycosyltransferases.

机构信息

RIKEN Plant Science Center, 1-7-22 Suehiro-cho, Yokohama 230-0045, Japan.

出版信息

Plant J. 2011 Apr;66(1):182-93. doi: 10.1111/j.1365-313X.2011.04493.x.

Abstract

Glycosyltransferases (GTs) (EC 2.4.x.y) catalyze the transfer of sugar moieties to a wide range of acceptor molecules, such as sugars, lipids, proteins, nucleic acids, antibiotics and other small molecules, including plant secondary metabolites. These enzymes can be classified into at least 92 families, of which family 1 glycosyltransferases (GT1), often referred to as UDP glycosyltransferases (UGTs), is the largest in the plant kingdom. To understand how UGTs expanded in both number and function during evolution of land plants, we screened genome sequences from six plants (Physcomitrella patens, Selaginella moellendorffii, Populus trichocarpa, Oryza sativa, Arabidopsis thaliana and Arabidopsis lyrata) for the presence of a conserved UGT protein domain. Phylogenetic analyses of the UGT genes revealed a significant expansion of UGTs, with lineage specificity and a higher duplication rate in vascular plants after the divergence of Physcomitrella. The UGTs from the six species fell into 24 orthologous groups that contained genes derived from the common ancestor of these six species. Some orthologous groups contained multiple UGT families with known functions, suggesting that UGTs discriminate compounds as substrates in a lineage-specific manner. Orthologous groups containing only a single UGT family tend to play a crucial role in plants, suggesting that such UGT families may have not expanded because of evolutionary constraints.

摘要

糖基转移酶(GTs)(EC 2.4.x.y)催化糖基转移到广泛的受体分子上,如糖、脂质、蛋白质、核酸、抗生素和其他小分子,包括植物次生代谢物。这些酶至少可以分为 92 个家族,其中家族 1 糖基转移酶(GT1),通常称为 UDP 糖基转移酶(UGTs),是植物界中最大的家族。为了了解 UGTs 在陆地植物进化过程中数量和功能是如何扩张的,我们从六种植物(石松、卷柏、毛白杨、水稻、拟南芥和拟南芥)的基因组序列中筛选出保守的 UGT 蛋白结构域。UGT 基因的系统发育分析显示,UGTs 显著扩张,在 Physcomitrella 分化后,在维管植物中具有谱系特异性和更高的复制率。这六种植物的 UGT 分为 24 个直系同源群,其中包含来自这六种植物共同祖先的基因。一些直系同源群包含具有已知功能的多个 UGT 家族,表明 UGTs 以谱系特异性的方式区分化合物作为底物。只包含单个 UGT 家族的直系同源群往往在植物中起着至关重要的作用,这表明这些 UGT 家族可能由于进化限制而没有扩张。

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