Ma Yu, Song Jiafeng, Sheng Suao, Wang Daijuan, Wang Tongtong, Wang Nan, Chen Airu, Wang Lixia, Peng Yaxuan, Ma Yuhan, Lv Zhaoyan, Zhu Xiaobiao, Hou Hualan
School of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
BMC Genomics. 2024 Dec 18;25(1):1206. doi: 10.1186/s12864-024-11140-1.
UDP-glycosyltransferases (UGTs) widely exist in plants and play essential roles in catalyzing the glycosylation reaction associated with metabolic processes. UGT gene family has been identified in many species to date. However, the comprehensive identification and systematic analysis have not been documented yet in the latest potato genome. In this study, a total of 295 UGT members (StUGT) were identified and found to be unevenly distributed on twelve chromosomes of potato. All StUGT genes were classified into 17 groups (A-P, R) and the UGT genes within the same groups have similar structural characterization. Tandem duplication was the major driving force for the StUGT gene expansion. The prediction of cis-acting elements showed that the development process, light, phytohormone, and abiotic stress-responsive elements generally existed in StUGT promoter regions. Analysis of spatial and temporal expression patterns demonstrated that StUGT genes were widely and differentially expressed in various tissues. Additionally, to investigate the salt stress-responsive genes, we analyzed the expression profiles of the StUGT genes under salt treatment. A total of 50 and 20 StUGT genes were continuously up- and down-regulated, respectively, implicating that these genes were involved in the regulation of salt tolerance. Among them, the StUGT178 gene, which was significantly induced by salt stress and contains salt-responsive element, was considered as one of the most relevant candidate genes. Transient transformation of the StUGT178 promoter in tobacco revealed that the transcriptional activation activity of the StUGT178 gene was strengthened under salt treatment. Furthermore, the heterologous expressions of the promoter and coding protein of the StUGT178 gene in Arabidopsis further demonstrated that the StUGT178 gene significantly responds to salt treatment, and enhanced salinity tolerance by regulating antioxidant enzyme activity and HO accumulation. These results provide comprehensive information for a better understanding of the StUGT genes and offer a foundation for uncovering their function associated with salt stress in potato.
尿苷二磷酸糖基转移酶(UGTs)广泛存在于植物中,在催化与代谢过程相关的糖基化反应中发挥着重要作用。迄今为止,已在许多物种中鉴定出UGT基因家族。然而,最新的马铃薯基因组中尚未有关于其全面鉴定和系统分析的报道。在本研究中,共鉴定出295个UGT成员(StUGT),发现它们不均匀地分布在马铃薯的12条染色体上。所有StUGT基因被分为17组(A - P、R),同一组内的UGT基因具有相似的结构特征。串联重复是StUGT基因扩增的主要驱动力。顺式作用元件预测表明,发育过程、光、植物激素和非生物胁迫响应元件普遍存在于StUGT启动子区域。时空表达模式分析表明,StUGT基因在各种组织中广泛且差异表达。此外,为了研究盐胁迫响应基因,我们分析了盐处理下StUGT基因的表达谱。分别有50个和20个StUGT基因持续上调和下调,这表明这些基因参与了耐盐性的调控。其中,受盐胁迫显著诱导且含有盐响应元件的StUGT178基因被认为是最相关的候选基因之一。StUGT178启动子在烟草中的瞬时转化表明,盐处理下StUGT178基因的转录激活活性增强。此外,StUGT178基因启动子和编码蛋白在拟南芥中的异源表达进一步证明,StUGT178基因对盐处理有显著响应,并通过调节抗氧化酶活性和过氧化氢积累增强了耐盐性。这些结果为更好地理解StUGT基因提供了全面信息,并为揭示它们在马铃薯中与盐胁迫相关的功能奠定了基础。