Veterinary Research Institute, Hudcova 70, 621 00 Brno, Czech Republic.
Cell Mol Life Sci. 2011 Nov;68(21):3607-17. doi: 10.1007/s00018-011-0671-0. Epub 2011 Mar 31.
Unlike all of the other retrons, the bacterial retron reverse transcriptase RrtE is capable of synthesizing small double-stranded DNA (sdsDNA) from template RNA. In this study, we analyzed the biosynthesis of the sdsDNA by RrtE in detail. We found out that the initiation of reverse transcription was dependent on a novel self-priming mechanism utilizing a free 3'OH of RNA that is reverse-transcribed into sdsDNA. The priming of the sdsDNA synthesis was not dependent on any particular nucleotide being used as a donor of 3'OH (unlike all of the other retrons, which prime from 2'OH of a particular guanosine) or any particular nucleotide being introduced into the sdsDNA first. Due to the relaxed demands for the initiation of reverse transcription, RrtE has the potential to generate dsDNA from different RNA transcripts in vivo.
与所有其他反转录子不同,细菌反转录子反转录酶 RrtE 能够从模板 RNA 合成小的双链 DNA (sdsDNA)。在这项研究中,我们详细分析了 RrtE 合成 sdsDNA 的过程。我们发现,逆转录的起始依赖于一种新颖的自我启动机制,该机制利用了 RNA 的游离 3'OH,该 3'OH 被逆转录成 sdsDNA。sdsDNA 合成的引发不依赖于任何特定的核苷酸作为 3'OH 的供体(与所有其他反转录子不同,它们从特定鸟苷的 2'OH 开始引发),也不依赖于任何特定的核苷酸首先被引入 sdsDNA。由于逆转录起始的要求放宽,RrtE 有可能在体内从不同的 RNA 转录本生成 dsDNA。