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基于互补锁式引物的实时 PCR 方法增强对柯克斯体的检测。

Enhanced detection of Coxiella burnetii with a complementary locked primer-based real-time PCR method.

机构信息

Division of Zoonoses, Center for Immunology and Pathology, National Institute of Health, Korea Centers for Disease Control Prevention, Chungcheongbuk-do, Korea.

出版信息

Mol Diagn Ther. 2011 Apr 1;15(2):103-7. doi: 10.1007/BF03256399.

DOI:10.1007/BF03256399
PMID:21452906
Abstract

BACKGROUND AND OBJECTIVE

Coxiella burnetii is the bacterial causative agent of Q fever in humans. Because Q fever can establish itself with an initial inoculation of fewer than ten C. burnetii cells, a sensitive detection method for C. burnetii infection is needed for early detection. We aimed to evaluate the effectiveness of a complementary locked primer (CLP)-based real-time PCR method for sensitive detection of C. burnetii infection.

METHODS

To evaluate the ability of CLPs to enhance the efficiency of the real-time PCR assay for the C. burnetii IS1111 insertion sequence, the mean threshold cycle values from 20 real-time PCR replicates with either CLPs or conventional primers were determined using tenfold serial dilutions (102-108) of purified C. burnetii Nine Mile genomic DNA. In addition, the cross-reactivity between C. burnetii and 31 non-Coxiella species was examined.

RESULTS

The CLP-based real-time PCR allowed specific and reliable detection of as few as 59 copies of the IS1111 element present in the genome of C. burnetii, which represents approximately 2.96 genome equivalents or three cells of C. burnetii. These results demonstrate the effectiveness of CLP-based real-time PCR for sensitive detection of C. burnetii infection.

CONCLUSION

It can be concluded that the CLP-based real-time PCR assay is a more appropriate method for sensitive detection and quantification of C. burnetii than previously reported methods.

摘要

背景与目的

柯克斯体是人类贝氏柯克斯体病的细菌病原体。由于 Q 热可以通过初始接种少于 10 个贝氏柯克斯体细胞而建立,因此需要一种用于早期检测的贝氏柯克斯体感染的敏感检测方法。我们旨在评估基于互补锁定引物(CLP)的实时 PCR 方法对贝氏柯克斯体感染的检测效果。

方法

为了评估 CLP 对提高基于实时 PCR 检测贝氏柯克斯体 IS1111 插入序列效率的能力,使用 10 倍系列稀释(102-108)的纯化贝氏柯克斯体 Nine Mile 基因组 DNA,通过 20 次实时 PCR 重复实验确定使用 CLP 或常规引物的平均阈值循环值。此外,还检测了 CLP 与 31 种非柯克斯体物种之间的交叉反应性。

结果

基于 CLP 的实时 PCR 允许特异性和可靠地检测到存在于贝氏柯克斯体基因组中的 IS1111 元件的低至 59 个拷贝,这代表大约 2.96 个基因组当量或 3 个贝氏柯克斯体细胞。这些结果表明 CLP 基于实时 PCR 用于敏感检测贝氏柯克斯体感染的有效性。

结论

可以得出结论,CLP 基于实时 PCR 检测比以前报道的方法更适合用于敏感检测和定量贝氏柯克斯体。

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本文引用的文献

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Real-time PCR with serum samples is indispensable for early diagnosis of acute Q fever.血清样本的实时聚合酶链反应对于急性Q热的早期诊断不可或缺。
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Real-time PCR for the early detection and quantification of Coxiella burnetii as an alternative to the murine bioassay.用于早期检测和定量伯纳特柯克斯体的实时聚合酶链反应,作为鼠类生物测定法的替代方法。
Mol Cell Probes. 2009 Jun-Aug;23(3-4):127-31. doi: 10.1016/j.mcp.2009.01.004. Epub 2009 Jan 22.
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IS1111 insertion sequences of Coxiella burnetii: characterization and use for repetitive element PCR-based differentiation of Coxiella burnetii isolates.
伯氏考克斯氏体的IS1111插入序列:特性及用于基于重复元件PCR的伯氏考克斯氏体分离株鉴别
BMC Microbiol. 2007 Oct 18;7:91. doi: 10.1186/1471-2180-7-91.
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Diagnosis of acute Q fever by PCR on sera during a recent outbreak in rural south Australia.在南澳大利亚农村地区近期爆发的疫情期间,通过血清PCR诊断急性Q热。
Ann N Y Acad Sci. 2006 Oct;1078:566-9. doi: 10.1196/annals.1374.112.
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Highly sensitive real-time PCR for specific detection and quantification of Coxiella burnetii.用于特异性检测和定量伯纳特立克次体的高灵敏度实时聚合酶链反应
BMC Microbiol. 2006 Jan 19;6:2. doi: 10.1186/1471-2180-6-2.
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Natural history and pathophysiology of Q fever.Q热的自然史和病理生理学
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Q fever in California; recovery of Coxiella burnetii from naturally-infected air-borne dust.加利福尼亚的Q热;从自然感染的空气传播尘埃中分离出伯氏考克斯氏体
J Immunol. 1950 Aug;65(2):211-20.
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Measurement of the antibiotic susceptibility of Coxiella burnetii using real time PCR.使用实时聚合酶链反应测定伯氏考克斯氏体的抗生素敏感性。
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Comparison of PCR and serology assays for early diagnosis of acute Q fever.用于急性Q热早期诊断的聚合酶链反应(PCR)检测与血清学检测的比较
J Clin Microbiol. 2003 Nov;41(11):5094-8. doi: 10.1128/JCM.41.11.5094-5098.2003.
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Q fever: a biological weapon in your backyard.Q热:你家后院的一种生物武器。
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