Department of Nuclear Medicine, and the Institute of Radiation Medicine, Medical Research Center, Seoul National University, Seoul 151-742, Republic of Korea.
IEEE Trans Med Imaging. 2011 May;30(5):1154-65. doi: 10.1109/TMI.2011.2140380. Epub 2011 Apr 7.
Partial correlation is a useful connectivity measure for brain networks, especially, when it is needed to remove the confounding effects in highly correlated networks. Since it is difficult to estimate the exact partial correlation under the small- n large- p situation, a sparseness constraint is generally introduced. In this paper, we consider the sparse linear regression model with a l(1)-norm penalty, also known as the least absolute shrinkage and selection operator (LASSO), for estimating sparse brain connectivity. LASSO is a well-known decoding algorithm in the compressed sensing (CS). The CS theory states that LASSO can reconstruct the exact sparse signal even from a small set of noisy measurements. We briefly show that the penalized linear regression for partial correlation estimation is related to CS. It opens a new possibility that the proposed framework can be used for a sparse brain network recovery. As an illustration, we construct sparse brain networks of 97 regions of interest (ROIs) obtained from FDG-PET imaging data for the autism spectrum disorder (ASD) children and the pediatric control (PedCon) subjects. As validation, we check the network reproducibilities by leave-one-out cross validation and compare the clustered structures derived from the brain networks of ASD and PedCon.
偏相关是一种有用的脑网络连接度量方法,特别是在需要去除高度相关网络中的混杂效应时。由于在小 n 大 p 情况下很难估计精确的偏相关,因此通常会引入稀疏性约束。在本文中,我们考虑了具有 l(1)-范数惩罚的稀疏线性回归模型,也称为最小绝对收缩和选择算子 (LASSO),用于估计稀疏脑连接。LASSO 是压缩感知 (CS) 中的一种著名解码算法。CS 理论表明,即使从少量噪声测量中,LASSO 也可以重建精确的稀疏信号。我们简要表明,用于偏相关估计的惩罚线性回归与 CS 有关。这为提出的框架可用于稀疏脑网络恢复开辟了新的可能性。作为说明,我们构建了来自 FDG-PET 成像数据的 97 个感兴趣区域 (ROI) 的稀疏脑网络,用于自闭症谱系障碍 (ASD) 儿童和儿科对照组 (PedCon) 受试者。作为验证,我们通过留一法交叉验证检查网络的可重复性,并比较从 ASD 和 PedCon 的脑网络中得出的聚类结构。