School of Chemistry, University of New South Wales, Sydney, 2052, Australia.
Dalton Trans. 2011 May 28;40(20):5516-27. doi: 10.1039/c1dt10240k. Epub 2011 Apr 12.
Nitrogenase enzymes containing molybdenum normally reduce N(2) to NH(3), and are severely inhibited by CO, but vanadium-nitrogenase reduces CO to hydrocarbons C(2)H(4), C(2)H(6) and C(3)H(8). Aspects of the mechanism of this unexpected and unprecedented reaction have been investigated by density functional simulations of the iron-vanadium cofactor FeV-co [NFe(7)VS(9)(homocitrate)] protein-bound by cysteine and histidine. It is found that the intramolecular hydrogenating machinery previously proposed for N(2) reduction (including H-atom tunneling) can also effect reduction of CO. There are feasible steps for all of the requisite components of the overall reaction, namely (i) the binding of CO, (ii) the initial hydrogenation of CO to HCO, (iii) continued hydrogenations of CO at both C and O to HCOH and H(2)COH, (iv) eliminations of O as H(2)O, and (v) the C-C bond formation steps. Intermediate organic fragments can migrate around the active face of FeV-co, and hydrogen bonding between COH functions and S or SH components of FeV-co can occur and contribute to the stabilisation and orientation of intermediates. It is suggested that the difference between Mo-nitrogenase and V-nitrogenase occurs in the immediately surrounding protein, which facilitates (possibly via water associated with homocitrate bound to V) the exogenous protonation and dehydration of -COH intermediates.
含钼的氮酶通常将 N(2)还原为 NH(3),并被 CO 严重抑制,但钒氮酶将 CO 还原为烃类 C(2)H(4)、C(2)H(6)和 C(3)H(8)。通过对含铁-钒辅因子 FeV-co [NFe(7)VS(9)(同型柠檬酸)]的密度泛函模拟,研究了这种出乎意料和前所未有的反应的机制的各个方面,该辅因子由半胱氨酸和组氨酸结合蛋白。研究发现,先前提出的用于 N(2)还原的分子内加氢机制(包括 H-原子隧穿)也可以影响 CO 的还原。对于整个反应的所有必需组分,都有可行的步骤,即 (i) CO 的结合,(ii) CO 的初始加氢为 HCO,(iii) CO 在 C 和 O 处的进一步加氢为 HCOH 和 H(2)COH,(iv) O 作为 H(2)O 的消除,以及 (v) C-C 键形成步骤。中间有机片段可以在 FeV-co 的活性面上迁移,并且 COH 功能和 FeV-co 的 S 或 SH 成分之间的氢键可以发生并有助于中间体的稳定和定向。有人认为,Mo-氮酶和 V-氮酶之间的区别在于周围的蛋白质,它促进(可能通过与 V 结合的同型柠檬酸中的水)-COH 中间体的外源质子化和脱水。