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孤立的四残基中性肽链的紧密折叠:氢键模式和熵效应。

Compact folding of isolated four-residue neutral peptide chains: H-bonding patterns and entropy effects.

机构信息

CEA Saclay, DSM, IRAMIS, Service des Photons, Atomes et Molécules and CNRS, Laboratoire Francis Perrin, URA CNRS 2453, Bât 522, CEA Saclay, 91191 Gif-sur-Yvette, France.

出版信息

Chemphyschem. 2011 Jul 11;12(10):1889-99. doi: 10.1002/cphc.201001023. Epub 2011 Apr 13.

Abstract

The intrinsic folding of isolated neutral tetrapeptides is investigated by IR-UV double-resonance laser spectroscopy coupled to quantum chemistry (DFT-D) calculations. Laser-desorbed jet-cooled Ac-(Ala)(3)-Phe-NH(2) as well as two other related four-residue molecules are shown to fold according to the same 14-7L-X-10II'-7L compact, β-hairpin-like backbone pattern, leading to a remarkable closed daisy chain of H-bonds along the molecule. Thermodynamic calculations confronted to the abundances observed show that these laser-desorbed peptides are best described by a finite conformational temperature (typically ca. 300-450 K), which suggests that not only enthalpy but also entropy effects play an important role in selecting these structures within this temperature range.

摘要

采用 IR-UV 双共振激光光谱学与量子化学(DFT-D)计算相结合的方法,研究了分离中性四肽的固有折叠。激光解吸喷射冷却的 Ac-(Ala)(3)-Phe-NH(2) 以及另外两种相关的四肽分子,均按照相同的 14-7L-X-10II'-7L 紧凑、β-发夹样的骨架模式折叠,形成了分子内显著的氢键封闭的雏菊链。与观察到的丰度进行的热力学计算表明,这些激光解吸肽最好用有限构象温度(通常约为 300-450 K)来描述,这表明不仅焓而且熵效应对在该温度范围内选择这些结构起着重要作用。

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