Suppr超能文献

钴(II)取代的流感嗜血杆菌β-碳酸酐酶:pH 和碳酸氢根离子对别构调节的光谱证据。

Co(II)-substituted Haemophilus influenzae β-carbonic anhydrase: spectral evidence for allosteric regulation by pH and bicarbonate ion.

机构信息

Department of Chemistry, Colgate University, Hamilton, NY 13346, USA.

出版信息

Arch Biochem Biophys. 2011 Jul;511(1-2):80-7. doi: 10.1016/j.abb.2011.04.013. Epub 2011 Apr 22.

Abstract

Cobalt(II)-substituted Haemophilus influenzae β-carbonic anhydrase (HICA) has been produced by overexpression in minimal media supplemented with CoCl(2), enabling kinetic, structural, and spectroscopic characterization. Co(II)-substituted HICA (Co-HICA) has comparable catalytic activity to that of wild-type enzyme with k(cat)=82±19 ms(-1) (120% of wild-type). The X-ray crystal structure of Co-HICA was determined to 2.5Å resolution, and is similar to the zinc enzyme. The absorption spectrum of Co-HICA is consistent with four-coordinate geometry. pH-dependent changes in the absorption spectrum of Co-HICA, including an increase in molar absorptivity and a red shift of a 580 nm peak with decreasing pH, correlate with the pH dependence of k(cat)/K(m). The absence of isosbestic points in the pH-dependent absorption spectra suggest that more than two absorbing species are present. The addition of bicarbonate ion at pH 8.0 triggers spectral changes in the metal coordination sphere that mimic that of lowering pH, supporting its hypothesized role as an allosteric inhibitor of HICA. Homogeneously (99±1% Co) and heterogeneously (52±5% Co) substituted Co-HICA have distinctly different colors and absorption spectra, suggesting that the metal ions in the active sites in the allosteric dimer of Co-HICA engage in intersubunit communication.

摘要

钴(II)取代的流感嗜血杆菌β-碳酸酐酶(HICA)通过在补充 CoCl2 的最小培养基中过表达产生,从而能够进行动力学、结构和光谱表征。钴(II)取代的 HICA(Co-HICA)与野生型酶具有可比的催化活性,kcat=82±19 ms-1(120%为野生型)。Co-HICA 的 X 射线晶体结构已确定至 2.5Å 分辨率,与锌酶相似。Co-HICA 的吸收光谱与四配位几何形状一致。Co-HICA 的吸收光谱随 pH 值的变化,包括摩尔吸光率的增加和 580nm 峰的红移随 pH 值降低而降低,与 kcat/Km 的 pH 值依赖性相关。在 pH 依赖性吸收光谱中没有等色点表明存在多于两种吸收物种。在 pH 8.0 下添加碳酸氢根离子会触发金属配位球的光谱变化,类似于降低 pH 值,支持其作为 HICA 的别构抑制剂的假设作用。均相(99±1%Co)和异相(52±5%Co)取代的 Co-HICA 具有明显不同的颜色和吸收光谱,表明在别构二聚体中活性位点的金属离子参与亚基间的通讯。

相似文献

1
Co(II)-substituted Haemophilus influenzae β-carbonic anhydrase: spectral evidence for allosteric regulation by pH and bicarbonate ion.
Arch Biochem Biophys. 2011 Jul;511(1-2):80-7. doi: 10.1016/j.abb.2011.04.013. Epub 2011 Apr 22.
2
Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry. 2010 May 4;49(17):3640-7. doi: 10.1021/bi100328j.
3
Allosteric site variants of Haemophilus influenzae beta-carbonic anhydrase.
Biochemistry. 2009 Jul 7;48(26):6146-56. doi: 10.1021/bi900663h.
4
Allosteric reversion of Haemophilus influenzae β-carbonic anhydrase via a proline shift.
Biochemistry. 2015 Jan 20;54(2):598-611. doi: 10.1021/bi501116e. Epub 2014 Dec 24.
6
Comparison of solution and crystal properties of Co(II)-substituted human carbonic anhydrase II.
Arch Biochem Biophys. 2010 Oct 1;502(1):53-9. doi: 10.1016/j.abb.2010.07.010. Epub 2010 Jul 14.
7
Bicarbonate as a proton donor in catalysis by Zn(II)- and Co(II)-containing carbonic anhydrases.
J Am Chem Soc. 2001 Jun 27;123(25):5861-6. doi: 10.1021/ja010301o.
9
Co(II) Substitution Enhances the Esterase Activity of a de Novo Designed Zn(II) Carbonic Anhydrase.
Chemistry. 2024 Apr 25;30(24):e202304367. doi: 10.1002/chem.202304367. Epub 2024 Mar 12.
10
Nontypeable Haemophilus influenzae carbonic anhydrase is important for environmental and intracellular survival.
J Bacteriol. 2013 Jun;195(12):2737-46. doi: 10.1128/JB.01870-12. Epub 2013 Apr 5.

引用本文的文献

1
Response to Perspectives on the Classical Enzyme Carbonic Anhydrase and the Search for Inhibitors.
Biophys J. 2021 Jan 5;120(1):178-181. doi: 10.1016/j.bpj.2020.11.011. Epub 2020 Dec 8.
2
Carbonic Anhydrase Inhibitors Targeting Metabolism and Tumor Microenvironment.
Metabolites. 2020 Oct 14;10(10):412. doi: 10.3390/metabo10100412.
3
The Complex Relationship between Metals and Carbonic Anhydrase: New Insights and Perspectives.
Int J Mol Sci. 2016 Jan 19;17(1):127. doi: 10.3390/ijms17010127.
4
Topiramate ameliorates abdominal aorta cross-clamping induced liver injury in rats.
Saudi J Gastroenterol. 2014 Sep-Oct;20(5):297-303. doi: 10.4103/1319-3767.141690.
5
Three functional β-carbonic anhydrases in Pseudomonas aeruginosa PAO1: role in survival in ambient air.
Microbiology (Reading). 2013 Aug;159(Pt 8):1748-1759. doi: 10.1099/mic.0.066357-0. Epub 2013 May 31.
6
Nontypeable Haemophilus influenzae carbonic anhydrase is important for environmental and intracellular survival.
J Bacteriol. 2013 Jun;195(12):2737-46. doi: 10.1128/JB.01870-12. Epub 2013 Apr 5.
8
Bacterial carbonic anhydrases as drug targets: toward novel antibiotics?
Front Pharmacol. 2011 Jul 5;2:34. doi: 10.3389/fphar.2011.00034. eCollection 2011.

本文引用的文献

2
Features and development of Coot.
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. doi: 10.1107/S0907444910007493. Epub 2010 Mar 24.
3
Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry. 2010 May 4;49(17):3640-7. doi: 10.1021/bi100328j.
4
Structure and catalytic mechanism of the beta-carbonic anhydrases.
Biochim Biophys Acta. 2010 Feb;1804(2):362-73. doi: 10.1016/j.bbapap.2009.08.002. Epub 2009 Aug 11.
5
Phaser crystallographic software.
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
6
Allosteric site variants of Haemophilus influenzae beta-carbonic anhydrase.
Biochemistry. 2009 Jul 7;48(26):6146-56. doi: 10.1021/bi900663h.
7
Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature. 2008 Mar 6;452(7183):56-61. doi: 10.1038/nature06636.
10
Kinetic and spectroscopic studies on the quercetin 2,3-dioxygenase from Bacillus subtilis.
Biochemistry. 2006 Jan 24;45(3):1009-16. doi: 10.1021/bi051571c.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验