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结核分枝杆菌H37Rv中Rv3168的克隆、表达、纯化、结晶及X射线晶体学分析

Cloning, expression, purification, crystallization and X-ray crystallographic analysis of Rv3168 from Mycobacterium tuberculosis H37Rv.

作者信息

Kim Sangwoo, Nguyen Chi My Thi, Yeo Seung Joo, Ahn Jae Woo, Kim Eun Jung, Kim Kyung Jin

机构信息

Pohang Accelerator Laboratory, Pohang University of Science and Technology, Pohang, Kyungbuk 790-784, Republic of Korea.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 May 1;67(Pt 5):627-9. doi: 10.1107/S1744309111010487. Epub 2011 Apr 28.

Abstract

Tuberculosis is a widespread and deadly infectious disease, with one third of the human population already being infected. Aminoglycoside antibiotics have become less effective in recent years owing to antibiotic resistance, which arises primarily through enzymatic modification of the antibiotics. The gene product Rv3168, a putative aminoglycoside phosphotransferase (APH), from Mycobacterium tuberculosis was crystallized using the sitting-drop vapour-diffusion method in the presence of 0.2 M calcium acetate, 0.1 M Tris-HCl pH 7.0 and 20% PEG 3000 at 295 K. X-ray diffraction data were collected to a maximum resolution of 1.67 Å on a synchrotron beamline. The crystal belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 56.74, b = 62.37, c = 103.61 Å. With one molecule per asymmetric unit, the crystal volume per unit protein weight (V(M)) is 2.91 Å(3) Da(-1). The structure was solved by the single-wavelength anomalous dispersion method and refinement of the selenomethionine structure is in progress.

摘要

结核病是一种广泛传播且致命的传染病,全球三分之一的人口已被感染。近年来,由于抗生素耐药性,氨基糖苷类抗生素的疗效有所下降,而这种耐药性主要是通过抗生素的酶促修饰产生的。结核分枝杆菌的假定氨基糖苷磷酸转移酶(APH)基因产物Rv3168,在295K下,于含有0.2M乙酸钙、0.1M Tris-HCl pH 7.0和20% PEG 3000的条件下,采用坐滴气相扩散法进行结晶。在同步加速器光束线上收集到最高分辨率为1.67 Å的X射线衍射数据。该晶体属于空间群P2(1)2(1)2(1),晶胞参数a = 56.74,b = 62.37,c = 103.61 Å。每个不对称单元含有一个分子,单位蛋白质重量的晶体体积(V(M))为2.91 Å(3) Da(-1)。该结构通过单波长反常色散法解析,硒代蛋氨酸结构的精修正在进行中。

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