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鹑鸡肠球菌氨基糖苷-2''-磷酸转移酶-Ic [APH(2'')-Ic] 的纯化、结晶及初步X射线分析

Purification, crystallization and preliminary X-ray analysis of aminoglycoside-2''-phosphotransferase-Ic [APH(2'')-Ic] from Enterococcus gallinarum.

作者信息

Byrnes Laura J, Badarau Adriana, Vakulenko Sergei B, Smith Clyde A

机构信息

Stanford Synchrotron Radiation Laboratory, Stanford University, Menlo Park, CA 94025, USA.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Feb 1;64(Pt 2):126-9. doi: 10.1107/S1744309108001450. Epub 2008 Jan 31.

Abstract

Bacterial resistance to aminoglycoside antibiotics is primarily the result of deactivation of the drugs. Three families of enzymes are responsible for this activity, with one such family being the aminoglycoside phosphotransferases (APHs). The gene encoding one of these enzymes, aminoglycoside-2''-phosphotransferase-Ic [APH(2'')-Ic] from Enterococcus gallinarum, has been cloned and the wild-type protein (comprising 308 amino-acid residues) and three mutants that showed elevated minimum inhibitory concentrations towards gentamicin (F108L, H258L and a double mutant F108L/H258L) were expressed in Escherichia coli and subsequently purified. All APH(2'')-Ic variants were crystallized in the presence of 14-20%(w/v) PEG 4000, 0.25 M MgCl(2), 0.1 M Tris-HCl pH 8.5 and 1 mM Mg(2)GTP. The crystals belong to the monoclinic space group C2, with one molecule in the asymmetric unit. The approximate unit-cell parameters are a = 82.4, b = 54.2, c = 77.0 A, beta = 108.8 degrees. X-ray diffraction data were collected to approximately 2.15 A resolution from an F108L crystal at beamline BL9-2 at SSRL, Stanford, California, USA.

摘要

细菌对氨基糖苷类抗生素的耐药性主要是药物失活的结果。有三类酶负责这种活性,其中一类是氨基糖苷磷酸转移酶(APHs)。编码其中一种酶,即来自鹑鸡肠球菌的氨基糖苷-2''-磷酸转移酶-Ic [APH(2'')-Ic] 的基因已被克隆,野生型蛋白(由308个氨基酸残基组成)和三个对庆大霉素表现出最低抑菌浓度升高的突变体(F108L、H258L和双突变体F108L/H258L)在大肠杆菌中表达,随后进行了纯化。所有APH(2'')-Ic变体在14 - 20%(w/v)聚乙二醇4000、0.25 M氯化镁、0. M Tris - HCl pH 8.5和1 mM Mg(2)GTP存在的情况下结晶。晶体属于单斜空间群C2,不对称单元中有一个分子。近似的晶胞参数为a = 82.4、b = 54.2、c = 77.0 Å,β = 108.8°。在美国加利福尼亚州斯坦福市SSRL的BL9 - 2光束线上,从F108L晶体收集了分辨率约为2.15 Å的X射线衍射数据。

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