Laboratorio de Micología Molecular Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autónoma de México (UNAM), Ciudad Universitaria No, 3000, México D.F., 04360, Mexico.
BMC Infect Dis. 2011 May 9;11:116. doi: 10.1186/1471-2334-11-116.
Epidemiological studies worldwide have shown that A. fumigatus exhibits important phenotypic and genotypic diversity, and these findings have been of great importance in improving the diagnosis and treatment of diseases caused by this fungus. However, few studies have been carried out related to the epidemiology of this fungus in Latin America. This study's aim is to report on the epidemiology of the fungus by analyzing the phenotypic variability of Aspergillus section Fumigati isolates from different Latin American countries and the relationship between this variability, the geographical origin and genotypic characteristics.
We analyzed the phenotypic characteristics (macro- and micromorphology, conidial size, vesicles size, antifungal susceptibility and thermotolerance at 28, 37 and 48°C) of A. section Fumigati isolates from Mexico (MX), Argentina (AR), Peru (PE) and France (FR). The results were analyzed using analysis of variance (ANOVA) and Tukey's multiple comparison test to detect significant differences. Two dendrograms among isolates were obtained with UPGMA using the Euclidean distance index. One was drawn for phenotypic data, and the other for phenotypic and genotypic data. A PCoA was done for shown isolates in a space of reduced dimensionality. In order to determine the degree of association between the phenotypic and genotypic characteristics AFLP, we calculated the correlation between parwise Euclidean distance matrices of both data sets with the nonparametric Mantel test.
No variability was found in the macromorphology of the studied isolates; however, the micromorphology and growth rate showed that the PE isolates grew at a faster rate and exhibited the widest vesicles in comparison to the isolates from MX, AR and FR. The dendrogram constructed with phenotypic data showed three distinct groups. The group I and II were formed with isolates from PE and FR, respectively, while group III was formed with isolates from MX and AR. The dendrogram with phenotypic and genotypic data showed the same cluster, except for an isolate from FR that formed a separate cluster. This cluster was confirmed using PCoA. The correlation between the phenotypic and genotypic data of the isolates revealed a statistically significant association between these characteristics.
The PE isolates showed specific phenotypic characteristics that clearly differentiate them from the rest of the isolates, which matches the genotypic data. The correlation between the phenotypic and genotypic characteristics showed a statistically significant association. In conclusion, phenotypic and genotypic methods together increase the power of correlation between isolates.
全球范围内的流行病学研究表明,烟曲霉表现出重要的表型和基因型多样性,这些发现对改善该真菌引起的疾病的诊断和治疗具有重要意义。然而,关于拉丁美洲该真菌的流行病学研究较少。本研究旨在通过分析来自不同拉丁美洲国家的烟曲霉节(Fumigati)分离株的表型变异性,以及这种变异性与地理起源和基因型特征之间的关系,报告该真菌的流行病学情况。
我们分析了来自墨西哥(MX)、阿根廷(AR)、秘鲁(PE)和法国(FR)的烟曲霉节分离株的表型特征(宏观和微观形态、分生孢子大小、泡囊大小、抗真菌药物敏感性和 28°C、37°C 和 48°C 时的耐热性)。使用方差分析(ANOVA)和 Tukey 多重比较检验分析结果,以检测显著差异。使用欧式距离指数,通过 UPGMA 获得两个分离株之间的树状图。一个是根据表型数据绘制的,另一个是根据表型和基因型数据绘制的。进行 PCoA 以在降维空间中展示分离株。为了确定 AFLP 表型和基因型特征之间的关联程度,我们使用非参数 Mantel 检验计算两个数据集的成对欧式距离矩阵之间的相关性。
研究分离株的宏观形态没有发现变异性;然而,微观形态和生长速度表明,与来自 MX、AR 和 FR 的分离株相比,PE 分离株生长速度更快,泡囊更宽。根据表型数据构建的树状图显示了三个不同的组。组 I 和 II 分别由来自 PE 和 FR 的分离株组成,而组 III 由来自 MX 和 AR 的分离株组成。根据表型和基因型数据构建的树状图显示了相同的聚类,除了一个来自 FR 的分离株形成了一个单独的聚类。该聚类通过 PCoA 得到了确认。分离株的表型和基因型数据之间的相关性显示出这些特征之间存在统计学上显著的关联。
PE 分离株表现出特定的表型特征,使其与其余分离株明显区分开来,与基因型数据相匹配。表型和基因型特征之间的相关性显示出统计学上显著的关联。总之,表型和基因型方法的结合增加了分离株之间相关性的能力。