Theoretical and Computational Chemistry Group (QTC), Physical Chemistry Department, Facultad de Ciencias Químicas, casilla 160-C, Universidad de Concepción, Concepción, Chile.
J Mol Model. 2011 Nov;17(11):2735-9. doi: 10.1007/s00894-011-1076-6. Epub 2011 May 11.
The equilibria among the various ionization and tautomeric states involved in the activation of ThDP is addressed using high level density functional theory calculations, X3LYP/6-311++G(d,p)//X3LYP(PB)/6-31++G(d,p). This study provides the first theoretically derived thermodynamic data for the internal equilibria in the activation of ThDP. The role of the medium polarity on the geometry and thermodynamics of the diverse equilibria of ThDP is addressed. The media chosen are cyclohexane and water, as paradigms of apolar and polar media. The results suggest that all ionization and tautomeric states are accessible during the catalytic cycle, even in the absence of substrate, being APH(+) the form required to interconvert the AP and IP tautomers; and the generation of the ylide proceeds via the formation of the IP form. Additionally, the calculated ΔG° values allow to calculate all the equilibrium constants, including the pK(C2) for the thiazolium C2 atom whose ionization is believed to initiate the catalytic cycle.
使用高精度密度泛函理论计算(X3LYP/6-311++G(d,p)//X3LYP(PB)/6-31++G(d,p))研究了噻唑烷二酮(ThDP)激活过程中涉及的各种离解和互变异构平衡之间的平衡。本研究提供了噻唑烷二酮激活过程中内部平衡的第一个理论推导的热力学数据。研究了介质极性对 ThDP 不同平衡的几何形状和热力学的影响。选择环己烷和水作为非极性和极性介质的范例。结果表明,在催化循环中,即使没有底物,所有的离解和互变异构态都是可及的,其中 APH(+)是在 AP 和 IP 互变异构体之间转换所需的形式;并且叶立德的生成是通过 IP 形式的形成进行的。此外,计算出的ΔG°值允许计算所有的平衡常数,包括噻唑 C2 原子的 pK(C2),其离解被认为是催化循环的起始点。