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固态 NMR 和密度泛函理论研究硫胺素的离子态。

Solid-state NMR and density functional theory studies of ionization states of thiamin.

机构信息

Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States.

出版信息

J Phys Chem B. 2011 Feb 3;115(4):730-6. doi: 10.1021/jp109765b. Epub 2010 Dec 22.

Abstract

Thiamin diphosphate (ThDP) is a key coenzyme in sugar metabolism. The 4'-aminopyrimidine ring of ThDP cycles through several ionization and tautomeric states during enzyme catalysis, but it is not fully understood which states are adopted during the individual steps of the catalytic cycle. Thiamin has been synthesized with labels selectively inserted into the C2 and C6' positions, as well as into the amino group, creating [C2, C6'-(13)C(2)] thiamin and [N4'-(15)N] thiamin. Magic-angle spinning (MAS) NMR spectroscopy has been employed to record the (13)C and (15)N chemical shift anisotropy (CSA) tensors for C2, C6', and N4' atoms. Our results indicate that the isotropic chemical shifts as well as the principal components of the (13)C and (15)N CSA tensors are very sensitive to the protonation states in these compounds and, therefore, permit differentiating between the two ionization states, 4-aminopyrimidine and 4-aminopyrimidinium. Using density functional theory (DFT), we have calculated the magnetic shielding anisotropy tensors of C2, C6', and N4' and found excellent agreement between the computed and the experimental tensors. Our findings indicate that MAS NMR spectroscopy in conjunction with DFT calculations is a sensitive probe of ionization states in the thiamin cofactor. The results of this study will serve as a guide for characterization of ionization and tautomeric states of thiamin in complexes with thiamin-dependent enzymes.

摘要

硫胺素二磷酸(ThDP)是糖代谢中的关键辅酶。在酶催化过程中,ThDP 的 4'-氨基嘧啶环经历了几个离子化和互变异构态,但对于催化循环的各个步骤中采用了哪些态还不完全清楚。已经合成了带有标签的硫胺素,这些标签选择性地插入到 C2 和 C6'位置,以及氨基中,形成 [C2, C6'-(13)C(2)]硫胺素和 [N4'-(15)N]硫胺素。魔角旋转(MAS)NMR 光谱已被用于记录 C2、C6'和 N4'原子的 (13)C 和 (15)N 化学位移各向异性(CSA)张量。我们的结果表明,这些化合物中质子化状态对各向同性化学位移以及 (13)C 和 (15)N CSA 张量的主分量非常敏感,因此可以区分两种离子化态,4-氨基嘧啶和 4-氨基嘧啶鎓。使用密度泛函理论(DFT),我们计算了 C2、C6'和 N4'的磁屏蔽各向异性张量,并发现计算张量与实验张量之间具有极好的一致性。我们的发现表明,MAS NMR 光谱与 DFT 计算相结合是探测硫胺素辅因子中离子化态的敏感探针。本研究的结果将为与硫胺素依赖酶结合的硫胺素的离子化和互变异构态的表征提供指导。

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