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基于表达序列标签的多态性简单重复序列标记在石莼属(Fucus serratus)及其它石莼属物种中的扩增。

Expressed sequence tag-derived polymorphic SSR markers for Fucus serratus and amplification in other species of Fucus.

机构信息

Department of Marine Benthic Ecology and Evolution, Centre for Ecological and Evolutionary Studies, Biological Centre, University of Groningen, Kerklaan 30, PO Box 14, 9750 AA Haren, The Netherlands, Alfred Wegener Institute, Am Handelshafen 12, D-27570 Bremerhaven, Germany, CCMAR-CIMAR, F.C.M.A., University of Algarve, Gambelas, 8005-139 Faro, Portugal.

出版信息

Mol Ecol Resour. 2009 Jan;9(1):168-70. doi: 10.1111/j.1755-0998.2008.02406.x. Epub 2008 Oct 21.

DOI:10.1111/j.1755-0998.2008.02406.x
PMID:21564592
Abstract

The seaweed genus Fucus is a dominant component of intertidal shores throughout the North Atlantic and North Pacific and has been the focus of considerable developmental, ecological, and evolutionary research for the past century. Here, we present details of 21 expressed sequence tag-derived simple sequence repeat markers (microsatellites). All 21 were polymorphic for F. serratus, which also display considerable cross-reactivity with the sister species F. distichus (18) and the more distantly related F. vesiculosus (13), and F. spiralis (5).

摘要

紫菜属(Fucus)是北大西洋和北太平洋潮间带的主要组成部分,在过去的一个世纪中,它一直是发育、生态和进化研究的重点。在这里,我们介绍了 21 个基于表达序列标签的简单序列重复标记(微卫星)的详细信息。所有 21 个标记在 F. serratus 中均表现出多态性,并且与姐妹种 F. distichus(18 个)和关系更远的 F. vesiculosus(13 个)和 F. spiralis(5 个)也有相当的交叉反应。

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引用本文的文献

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BMC Evol Biol. 2018 Jun 15;18(1):94. doi: 10.1186/s12862-018-1213-2.
2
Polymorphic microsatellite markers in the brown seaweed Fucus vesiculosus.褐藻墨角藻中的多态微卫星标记。
BMC Res Notes. 2015 Mar 8;8:73. doi: 10.1186/s13104-015-1035-x.
3
Fine-scale genetic breaks driven by historical range dynamics and ongoing density-barrier effects in the estuarine seaweed Fucus ceranoides L.
历史分布动态和持续的密度屏障效应对河口海藻石莼(Fucus ceranoides L.)产生精细遗传断裂
BMC Evol Biol. 2012 Jun 6;12:78. doi: 10.1186/1471-2148-12-78.
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