猪链球菌 3 型 ST3 株的全基因组序列
Complete genome sequence of Streptococcus suis serotype 3 strain ST3.
机构信息
Huazhong Agricultural University, Wuhan 430070, People's Republic of China.
出版信息
J Bacteriol. 2011 Jul;193(13):3428-9. doi: 10.1128/JB.05018-11. Epub 2011 May 13.
Abstract
Streptococcus suis is a zoonotic pathogen causing economic loss in the swine industry and is also a threat to human health. To date, the mechanism of pathogenesis is not fully understood. Here, we report the complete genome sequence of S. suis strain ST3 of serotype 3, which provides opportunities to reveal genetic basis of infection of S. suis non-serotype 2 strains.
摘要
猪链球菌（Streptococcus suis）是一种引起养猪业经济损失的动物病原体，也是对人类健康的威胁。迄今为止，其发病机制尚不完全清楚。在这里，我们报告了血清型 3 的 S. suis 菌株 ST3 的完整基因组序列，这为揭示非 2 型 S. suis 菌株感染的遗传基础提供了机会。
相似文献
1
Complete genome sequence of Streptococcus suis serotype 3 strain ST3.猪链球菌 3 型 ST3 株的全基因组序列
J Bacteriol. 2011 Jul;193(13):3428-9. doi: 10.1128/JB.05018-11. Epub 2011 May 13.
2
Genome sequence of the swine pathogen Streptococcus suis serotype 2 strain S735.猪链球菌 2 型 S735 菌株的基因组序列。
J Bacteriol. 2012 Nov;194(22):6343-4. doi: 10.1128/JB.01559-12.
3
Novel variant serotype of streptococcus suis isolated from piglets with meningitis.从患有脑膜炎的仔猪中分离出的新型猪链球菌血清型。
Appl Environ Microbiol. 2015 Feb;81(3):976-85. doi: 10.1128/AEM.02962-14. Epub 2014 Nov 21.
4
Complete genome sequence of Streptococcus suis serotype 14 strain JS14.猪链球菌 14 型 JS14 株的全基因组序列
J Bacteriol. 2011 May;193(9):2375-6. doi: 10.1128/JB.00083-11. Epub 2011 Mar 11.
5
Determining Streptococcus suis serotype from short-read whole-genome sequencing data.通过短读长全基因组测序数据确定猪链球菌血清型
BMC Microbiol. 2016 Jul 22;16(1):162. doi: 10.1186/s12866-016-0782-8.
6
SssP1, a Streptococcus suis Fimbria-Like Protein Transported by the SecY2/A2 System, Contributes to Bacterial Virulence.Sssp1，一种由 SecY2/A2 系统转运的猪链球菌菌毛样蛋白，有助于细菌毒力。
Appl Environ Microbiol. 2018 Aug 31;84(18). doi: 10.1128/AEM.01385-18. Print 2018 Sep 15.
7
Comparative genomic analysis of Streptococcus suis reveals significant genomic diversity among different serotypes.猪链球菌的比较基因组分析揭示了不同血清型之间显著的基因组多样性。
BMC Genomics. 2011 Oct 25;12:523. doi: 10.1186/1471-2164-12-523.
8
Genome-wide analysis of an avirulent strain that induces protective immunity against challenge with virulent Streptococcus suis serotype 2.对一种无毒菌株进行全基因组分析，该菌株可诱导针对强毒猪链球菌2型攻击的保护性免疫。
BMC Microbiol. 2017 Mar 14;17(1):67. doi: 10.1186/s12866-017-0971-0.
9
Molecular diagnostics and ITS-based phylogenic analysis of Streptococcus suis serotype 2 in central Vietnam.越南中部猪链球菌2型的分子诊断及基于ITS的系统发育分析
J Infect Dev Ctries. 2015 Jul 4;9(6):624-30. doi: 10.3855/jidc.7027.
10
VirA: a virulence-related gene of Streptococcus suis serotype 2.VirA：猪链球菌 2 型的一个毒力相关基因。
Microb Pathog. 2010 Nov;49(5):305-10. doi: 10.1016/j.micpath.2010.07.001. Epub 2010 Jul 17.
引用本文的文献
1
Function-based classification of hazardous biological sequences: Demonstration of a new paradigm for biohazard assessments.基于功能的有害生物序列分类：生物危害评估新范式的论证
Front Bioeng Biotechnol. 2022 Oct 7;10:979497. doi: 10.3389/fbioe.2022.979497. eCollection 2022.
2
Complete genome sequence of serotype 3 INT-01, isolated from a domestic pig in Korea.从韩国一头家猪中分离出的3型INT-01血清型的全基因组序列。
J Anim Sci Technol. 2021 May;63(3):662-665. doi: 10.5187/jast.2021.e47. Epub 2021 May 31.
3
Bacitracin resistance and enhanced virulence of Streptococcus suis via a novel efflux pump.通过新型外排泵导致猪链球菌对杆菌肽耐药性和毒力增强。
BMC Vet Res. 2019 Oct 28;15(1):377. doi: 10.1186/s12917-019-2115-2.
4
GAAP: Genome-organization-framework-Assisted Assembly Pipeline for prokaryotic genomes.GAAP：用于原核生物基因组的基因组组织框架辅助组装流程
BMC Genomics. 2017 Jan 25;18(Suppl 1):952. doi: 10.1186/s12864-016-3267-0.
5
The GAS PefCD exporter is a MDR system that confers resistance to heme and structurally diverse compounds.GAS PefCD外排泵是一种多药耐药系统，可赋予对血红素和结构多样化合物的抗性。
BMC Microbiol. 2016 Apr 19;16:68. doi: 10.1186/s12866-016-0687-6.
6
Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions.生产规模下沼气生产微生物群落的湿法或干法发酵条件下的比较宏基因组学。
Biotechnol Biofuels. 2015 Feb 8;8:14. doi: 10.1186/s13068-014-0193-8. eCollection 2015.
7
Streptococcus suis infection: an emerging/reemerging challenge of bacterial infectious diseases?猪链球菌感染：细菌性传染病一个新出现/再次出现的挑战？
Virulence. 2014 May 15;5(4):477-97. doi: 10.4161/viru.28595. Epub 2014 Mar 25.
8
Comparative genomic hybridization identifies virulence differences in Streptococcus suis.比较基因组杂交技术鉴定出猪链球菌的毒力差异。
PLoS One. 2014 Feb 4;9(2):e87866. doi: 10.1371/journal.pone.0087866. eCollection 2014.
9
Whole-Genome Sequence of Streptococcus suis Serotype 3 Strain YB51.猪链球菌3型菌株YB51的全基因组序列
Genome Announc. 2013 Oct 31;1(6):e00884-13. doi: 10.1128/genomeA.00884-13.
10
Genetic analysis of capsular polysaccharide synthesis gene clusters from all serotypes of Streptococcus suis: potential mechanisms for generation of capsular variation.对所有血清型猪链球菌荚膜多糖合成基因簇的遗传分析：荚膜变异产生的潜在机制。
Appl Environ Microbiol. 2013 Apr;79(8):2796-806. doi: 10.1128/AEM.03742-12. Epub 2013 Feb 15.
本文引用的文献
1
Streptococcus suis: a new emerging or an old neglected zoonotic pathogen?猪链球菌：一种新出现的还是被忽视的旧动物源性致病菌？
Future Microbiol. 2010 Mar;5(3):371-91. doi: 10.2217/fmb.10.2.
2
Serotype distribution and production of muramidase-released protein, extracellular factor and suilysin by field strains of Streptococcus suis isolated in the United States.美国分离的猪链球菌野毒株的血清型分布和胞壁酶溶蛋白、细胞外因子及溶血素的产生。
Vet Microbiol. 2009 Nov 18;139(3-4):310-7. doi: 10.1016/j.vetmic.2009.06.024. Epub 2009 Jun 21.
3
Characterization of Streptococcus suis isolates from the diseased pigs in China between 2003 and 2007.2003年至2007年间中国患病猪源猪链球菌分离株的特征分析
Vet Microbiol. 2009 May 28;137(1-2):196-201. doi: 10.1016/j.vetmic.2008.12.015. Epub 2008 Dec 24.
4
Significant contribution of the pgdA gene to the virulence of Streptococcus suis.pgdA基因对猪链球菌毒力的重要贡献。
Mol Microbiol. 2008 Dec;70(5):1120-35. doi: 10.1111/j.1365-2958.2008.06463.x.
5
The involvement of sortase A in high virulence of STSS-causing Streptococcus suis serotype 2.分选酶A与引起链球菌中毒性休克综合征的2型猪链球菌的高毒力有关。
Arch Microbiol. 2009 Jan;191(1):23-33. doi: 10.1007/s00203-008-0425-z. Epub 2008 Aug 21.
6
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.RNAmmer：核糖体RNA基因的一致性快速注释
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
7
A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates.从中国分离的 2 株猪链球菌比较基因组学看链球菌中毒性休克综合征
PLoS One. 2007 Mar 21;2(3):e315. doi: 10.1371/journal.pone.0000315.
8
Identifying bacterial genes and endosymbiont DNA with Glimmer.使用Glimmer识别细菌基因和内共生体DNA。
Bioinformatics. 2007 Mar 15;23(6):673-9. doi: 10.1093/bioinformatics/btm009. Epub 2007 Jan 19.
9
Versatile and open software for comparing large genomes.用于比较大型基因组的通用且开放的软件。
Genome Biol. 2004;5(2):R12. doi: 10.1186/gb-2004-5-2-r12. Epub 2004 Jan 30.
10
Contribution of fibronectin-binding protein to pathogenesis of Streptococcus suis serotype 2.纤连蛋白结合蛋白对猪链球菌2型发病机制的作用
Infect Immun. 2002 Mar;70(3):1319-25. doi: 10.1128/IAI.70.3.1319-1325.2002.
Zotero 插件