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瓜氨酸修饰噬菌体展示:一种新的高通量发现方法,用于鉴定含瓜氨酸的配体。

Citrulline-modified phage display: a novel high-throughput discovery approach for the identification of citrulline-containing ligands.

机构信息

Hasselt University, Biomedical Research Institute, Agoralaan, Diepenbeek, Belgium.

出版信息

Proteomics. 2011 Jun;11(12):2550-4. doi: 10.1002/pmic.201000783. Epub 2011 May 16.

DOI:10.1002/pmic.201000783
PMID:21584941
Abstract

Phage display is a high-throughput technology used to identify ligands for a given target. A drawback of the approach is the absence of PTMs in phage-displayed peptides. The applicability of phage display could be broadened considerably by the implementation of PTMs in this system. The aim of this study was to investigate the possible application of citrullination, a PTM of an arginine into a citrulline amino acid, in filamentous (M13) and lytic (T7) phage display. After in vitro citrullination of T7 and M13 phages, citrullination was confirmed and the infectivity of both citrullinated and non-citrullinated phage was compared by titer determination. We demonstrated the successful in vitro citrullination of T7 and M13 phage-displayed peptides. This in vitro modification did not affect the viability or infectivity of the T7 virions, a necessary prerequisite for the implementation of this approach in T7 phage display. For M13 phage, however, the infecting phage titer decreased five-fold upon citrullination, limiting the use of this modification in M13 phage display. In conclusion, in vitro citrullination can be applied in T7 phage display giving rise to a high-throughput and sensitive approach to identify citrulline-containing ligands by the use of the strengths of phage display technology.

摘要

噬菌体展示是一种高通量技术,用于鉴定给定靶标的配体。该方法的一个缺点是噬菌体展示的肽中缺乏 PTMs。通过在该系统中实施 PTMs,可以大大拓宽噬菌体展示的适用性。本研究的目的是研究精氨酸的一种 PTM 即瓜氨酸化,在丝状(M13)和裂解(T7)噬菌体展示中的可能应用。在体外对 T7 和 M13 噬菌体进行瓜氨酸化后,通过滴定确定了瓜氨酸化的确认和感染性,比较了瓜氨酸化和非瓜氨酸化噬菌体的感染性。我们证明了 T7 和 M13 噬菌体展示肽的体外瓜氨酸化成功。这种体外修饰不影响 T7 病毒粒子的活力或感染性,这是在 T7 噬菌体展示中实施这种方法的必要前提。然而,对于 M13 噬菌体,瓜氨酸化后感染噬菌体的滴度降低了五倍,限制了这种修饰在 M13 噬菌体展示中的应用。总之,体外瓜氨酸化可应用于 T7 噬菌体展示,通过利用噬菌体展示技术的优势,提供一种高通量和敏感的方法来鉴定含瓜氨酸的配体。

相似文献

1
Citrulline-modified phage display: a novel high-throughput discovery approach for the identification of citrulline-containing ligands.瓜氨酸修饰噬菌体展示:一种新的高通量发现方法,用于鉴定含瓜氨酸的配体。
Proteomics. 2011 Jun;11(12):2550-4. doi: 10.1002/pmic.201000783. Epub 2011 May 16.
2
T7 lytic phage-displayed peptide libraries exhibit less sequence bias than M13 filamentous phage-displayed peptide libraries.T7 裂解性噬菌体展示肽库比 M13 丝状噬菌体展示肽库表现出更少的序列偏差。
Proteomics. 2006 Aug;6(15):4210-22. doi: 10.1002/pmic.200500606.
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Size of the ligand complex between the N-terminal domain of the gene III coat protein and the non-infectious phage strongly influences the usefulness of in vitro selective infective phage technology.基因III外壳蛋白N端结构域与非感染性噬菌体之间配体复合物的大小,对体外选择性感染噬菌体技术的实用性有很大影响。
Biochem J. 2000 Dec 15;352 Pt 3(Pt 3):841-9.
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T7 displayed peptides as targets for selecting peptide specific scFvs from M13 scFv display libraries.以T7展示的肽为靶点,从M13单链抗体片段(scFv)展示文库中筛选肽特异性scFv。
J Immunol Methods. 2001 Nov 1;257(1-2):117-22. doi: 10.1016/s0022-1759(01)00454-9.
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General M13 phage display: M13 phage display in identification and characterization of protein-protein interactions.通用M13噬菌体展示:M13噬菌体展示在蛋白质-蛋白质相互作用的鉴定和表征中的应用
Methods Mol Biol. 2009;502:321-39. doi: 10.1007/978-1-60327-565-1_19.
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Characterizing specific phage-protein interactions by fluorescence correlation spectroscopy.通过荧光相关光谱法表征特定噬菌体 - 蛋白质相互作用
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Effect of protein properties on display efficiency using the M13 phage display system.蛋白质特性对使用M13噬菌体展示系统的展示效率的影响。
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An immuno-precipitation assay for determining specific interactions between antibodies and phage selected from random peptide expression libraries.一种用于确定抗体与从随机肽表达文库中筛选出的噬菌体之间特异性相互作用的免疫沉淀测定法。
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Ligand-mediated protection against phage lysis as a positive selection strategy for the enrichment of epitopes displayed on the surface of E. coli cells.配体介导的抗噬菌体裂解保护作用作为一种阳性选择策略,用于富集大肠杆菌细胞表面展示的表位。
Biol Chem. 2001 Dec;382(12):1669-77. doi: 10.1515/BC.2001.202.
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Interactions between peptides containing nucleobase amino acids and T7 phages displaying S. cerevisiae proteins.含核碱基氨基酸的肽与展示酿酒酵母蛋白的T7噬菌体之间的相互作用。
Biopolymers. 2007;88(2):131-40. doi: 10.1002/bip.20662.

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