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技术进展:基于端粒的年龄估计新策略。

TECHNICAL ADVANCES: New strategies for telomere-based age estimation.

机构信息

Department of Biology, Kenyon College, OH 43022, USA.

出版信息

Mol Ecol Resour. 2008 Mar;8(2):264-74. doi: 10.1111/j.1471-8286.2007.01973.x.

Abstract

Telomere dynamics link molecular and cellular mechanisms with organismal processes and therefore may explain variation in a number of important life-history traits. Telomere length has been used to estimate age in free-living populations of animals. Such estimation is a potentially powerful tool in the context of population dynamics and management, as well as the study of life-history trade-offs. The number of studies utilizing telomere restriction fragment assays in the fields of ecology and evolution is steadily growing. However, the field lacks methodological and analytical standardization resulting in considerable variation in telomere length and therefore in the usefulness of these techniques. Here, we illustrate new laboratory and analytical methods to reliably measure telomere length from blood erythrocytes and accurately assess the relationship between telomeres and age. We demonstrate the importance of analysing those telomeres most relevant to age-related studies: the shortest telomeres. We present a reliable method to quickly identify an analysis window (the telomere optimal estimate, TOE) which approaches the optimal window for age estimation. Because the TOE focuses on the shortest telomeres - those telomeres which signal cellular senescence and ageing - TOE can also be used to compare telomeres in age-matched individuals. We also compare constant- and pulsed-field gel electrophoresis to show how each can influence telomere measurement. The use of TOE should provide powerful telomere-based age estimation and enable organismal biologists to readily uncover individual and longitudinal differences with regard to telomere dynamics.

摘要

端粒动力学将分子和细胞机制与机体过程联系起来,因此可以解释许多重要的生活史特征的变化。端粒长度已被用于估计动物自由生活种群的年龄。这种估计在种群动态和管理以及生活史权衡研究方面是一种潜在的强大工具。在生态学和进化领域中,利用端粒限制片段分析的研究数量正在稳步增长。然而,该领域缺乏方法学和分析标准化,导致端粒长度存在相当大的差异,从而影响了这些技术的实用性。在这里,我们展示了从血液红细胞中可靠测量端粒长度并准确评估端粒与年龄之间关系的新实验室和分析方法。我们证明了分析与年龄相关研究最相关的端粒(最短端粒)的重要性。我们提出了一种可靠的方法来快速识别分析窗口(端粒最佳估计值,TOE),该窗口接近年龄估计的最佳窗口。由于 TOE 侧重于与细胞衰老和老化相关的最短端粒,因此 TOE 还可用于比较年龄匹配个体的端粒。我们还比较了恒定和脉冲场凝胶电泳,以展示它们如何影响端粒测量。使用 TOE 应该能够提供强大的基于端粒的年龄估计,并使机体生物学家能够轻松发现端粒动力学方面的个体和纵向差异。

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