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永久性遗传资源:从番荔枝(Annona cherimola Mill.)中开发 52 个新的多态性 SSR 标记:向相关分类群的转移以及选择一组减少的标记用于 DNA 指纹图谱和多样性研究。

PERMANENT GENETIC RESOURCES: Development of 52 new polymorphic SSR markers from cherimoya (Annona cherimola Mill.): transferability to related taxa and selection of a reduced set for DNA fingerprinting and diversity studies.

机构信息

E.E. la Mayora-CSIC, Algarrobo-Costa, Málaga 29750, Spain.

出版信息

Mol Ecol Resour. 2008 Mar;8(2):317-21. doi: 10.1111/j.1471-8286.2007.01941.x.

Abstract

Fifty-two single locus polymorphic microsatellites were developed using two genomic libraries digested with HaeIII and RsaI of cherimoya cv. Fino de Jete enriched in CT/AG repeats. A total of 222 alleles were detected with the selected simple sequence repeats (SSRs). The observed and expected heterozygosities ranged from 0.08 to 0.73 and from 0.20 to 0.84, respectively. Most of the SSRs were transferable to other species in the Annonaceae. A set of 20 microsatellites was selected to facilitate the exchange of data among laboratories.

摘要

利用富含 CT/AG 重复序列的凤梨释迦 cv. Fino de Jete 的 HaeIII 和 RsaI 两种基因组文库,开发了 52 个单基因座多态性微卫星。从所选的简单重复序列(SSR)中检测到 222 个等位基因。观察到的和预期的杂合度分别在 0.08 到 0.73 之间和 0.20 到 0.84 之间。大多数 SSR 可以转移到番荔枝科的其他物种中。选择了一组 20 个微卫星,以方便实验室之间的数据交换。

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