III 谱系李斯特菌 HCC23 株的基因组序列。
Genome sequence of lineage III Listeria monocytogenes strain HCC23.
机构信息
College of Veterinary Medicine, Mississippi State University, Mississippi State, Mississippi, USA.
出版信息
J Bacteriol. 2011 Jul;193(14):3679-80. doi: 10.1128/JB.05236-11. Epub 2011 May 20.
Abstract
More than 98% of reported human listeriosis cases are caused by Listeria monocytogenes serotypes within lineages I and II. Serotypes within lineage III (4a and 4c) are commonly isolated from environmental and food specimens. We report the first complete genome sequence of a lineage III isolate, HCC23, which will be used for comparative analysis.
摘要
超过 98%报告的人类李斯特菌病病例是由谱系 I 和 II 内的单增李斯特菌血清型引起的。谱系 III（4a 和 4c）内的血清型通常从环境和食品标本中分离出来。我们报告了第一个谱系 III 分离株 HCC23 的完整基因组序列，将用于比较分析。
相似文献
1
Genome sequence of lineage III Listeria monocytogenes strain HCC23.III 谱系李斯特菌 HCC23 株的基因组序列。
J Bacteriol. 2011 Jul;193(14):3679-80. doi: 10.1128/JB.05236-11. Epub 2011 May 20.
2
Genome comparison of Listeria monocytogenes serotype 4a strain HCC23 with selected lineage I and lineage II L. monocytogenes strains and other Listeria strains.单核细胞增生李斯特菌4a血清型菌株HCC23与选定的I系和II系单核细胞增生李斯特菌菌株及其他李斯特菌菌株的基因组比较。
Genom Data. 2014 Aug 7;2:219-25. doi: 10.1016/j.gdata.2014.06.010. eCollection 2014 Dec.
3
Genome sequence of Listeria monocytogenes 07PF0776, a cardiotropic serovar 4b strain.单核细胞增生李斯特氏菌 07PF0776 的基因组序列，一种心脏趋向性血清型 4b 菌株。
J Bacteriol. 2012 Jul;194(13):3552. doi: 10.1128/JB.00616-12.
4
Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7.非致病性李斯特菌血清型 4a 菌株 M7 的基因组序列。
J Bacteriol. 2011 Sep;193(18):5019-20. doi: 10.1128/JB.05501-11. Epub 2011 Jul 8.
5
Short-term genome evolution of Listeria monocytogenes in a non-controlled environment.单核细胞增生李斯特菌在非受控环境中的短期基因组进化
BMC Genomics. 2008 Nov 13;9:539. doi: 10.1186/1471-2164-9-539.
6
Genome-wide analyses reveal lineage specific contributions of positive selection and recombination to the evolution of Listeria monocytogenes.全基因组分析揭示了正选择和重组对单核细胞增生李斯特菌进化的谱系特异性贡献。
BMC Evol Biol. 2008 Aug 12;8:233. doi: 10.1186/1471-2148-8-233.
7
Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes.李斯特菌属 I、II 和 III 谱系的比较基因组学和转录组学。
BMC Genomics. 2012 Apr 24;13:144. doi: 10.1186/1471-2164-13-144.
8
Genome sequences of Listeria monocytogenes strains J1816 and J1-220, associated with human outbreaks.与人类疫情相关的李斯特菌 J1816 株和 J1-220 株的基因组序列。
J Bacteriol. 2011 Jul;193(13):3424-5. doi: 10.1128/JB.05048-11. Epub 2011 May 6.
9
A multiplex PCR for detection of Listeria monocytogenes and its lineages.一种用于检测单核细胞增生李斯特菌及其谱系的多重聚合酶链反应。
J Microbiol Methods. 2016 Nov;130:144-147. doi: 10.1016/j.mimet.2016.09.015. Epub 2016 Sep 23.
10
An SNP-based PCR assay to differentiate between Listeria monocytogenes lineages derived from phylogenetic analysis of the sigB gene.一种基于单核苷酸多态性的聚合酶链反应检测方法，用于区分源自sigB基因系统发育分析的单核细胞增生李斯特菌谱系。
J Microbiol Methods. 2003 Nov;55(2):425-32. doi: 10.1016/s0167-7012(03)00188-x.
引用本文的文献
1
Genomic Analysis of Prophages Recovered from Lysogens Found in Seafood and Seafood-Related Environment.从海鲜及与海鲜相关环境中溶源菌中回收的原噬菌体的基因组分析
Microorganisms. 2021 Jun 22;9(7):1354. doi: 10.3390/microorganisms9071354.
2
Small molecules targeting LapB protein prevent Listeria attachment to catfish muscle.靶向LapB蛋白的小分子可防止李斯特菌附着于鲶鱼肌肉。
PLoS One. 2017 Dec 18;12(12):e0189809. doi: 10.1371/journal.pone.0189809. eCollection 2017.
3
Core Genome Multilocus Sequence Typing for Identification of Globally Distributed Clonal Groups and Differentiation of Outbreak Strains of Listeria monocytogenes.用于鉴定全球分布的克隆群及区分单核细胞增生李斯特菌暴发菌株的核心基因组多位点序列分型
Appl Environ Microbiol. 2016 Sep 30;82(20):6258-6272. doi: 10.1128/AEM.01532-16. Print 2016 Oct 15.
4
Determination of Evolutionary Relationships of Outbreak-Associated Listeria monocytogenes Strains of Serotypes 1/2a and 1/2b by Whole-Genome Sequencing.通过全基因组测序确定与疫情相关的血清型1/2a和1/2b单核细胞增生李斯特菌菌株的进化关系
Appl Environ Microbiol. 2015 Nov 20;82(3):928-38. doi: 10.1128/AEM.02440-15. Print 2016 Feb 1.
5
The Listeria monocytogenes Core-Genome Sequence Typer (LmCGST): a bioinformatic pipeline for molecular characterization with next-generation sequence data.单核细胞增生李斯特菌核心基因组序列分型工具（LmCGST）：一种利用下一代测序数据进行分子特征分析的生物信息学流程。
BMC Microbiol. 2015 Oct 22;15:224. doi: 10.1186/s12866-015-0526-1.
6
Genome comparison of Listeria monocytogenes serotype 4a strain HCC23 with selected lineage I and lineage II L. monocytogenes strains and other Listeria strains.单核细胞增生李斯特菌4a血清型菌株HCC23与选定的I系和II系单核细胞增生李斯特菌菌株及其他李斯特菌菌株的基因组比较。
Genom Data. 2014 Aug 7;2:219-25. doi: 10.1016/j.gdata.2014.06.010. eCollection 2014 Dec.
7
Development of ListeriaBase and comparative analysis of Listeria monocytogenes.李斯特菌数据库的开发及单核细胞增生李斯特菌的比较分析。
BMC Genomics. 2015 Oct 6;16:755. doi: 10.1186/s12864-015-1959-5.
8
Genetic distance in the whole-genome perspective on Listeria monocytogenes strains F2-382 and NIHS-28 that show similar subtyping results.从全基因组角度看，单核细胞增生李斯特菌菌株F2 - 382和NIHS - 28的遗传距离显示出相似的亚型分析结果。
BMC Microbiol. 2014 Dec 10;14:309. doi: 10.1186/s12866-014-0309-0.
9
Evolutionary dynamics of the accessory genome of Listeria monocytogenes.李斯特菌附属基因组的进化动态。
PLoS One. 2013 Jun 25;8(6):e67511. doi: 10.1371/journal.pone.0067511. Print 2013.
10
Genome sequencing identifies two nearly unchanged strains of persistent Listeria monocytogenes isolated at two different fish processing plants sampled 6 years apart.基因组测序鉴定出两株几乎未发生变化的持续性单核细胞增生李斯特菌菌株，它们分别从相隔6年采样的两家不同鱼类加工厂中分离得到。
Appl Environ Microbiol. 2013 May;79(9):2944-51. doi: 10.1128/AEM.03715-12. Epub 2013 Feb 22.
本文引用的文献
1
Listeria monocytogenes serotype 4b strains belonging to lineages I and III possess distinct molecular features.属于谱系I和III的单核细胞增生李斯特菌4b血清型菌株具有不同的分子特征。
J Clin Microbiol. 2006 Jan;44(1):214-7. doi: 10.1128/JCM.44.1.214-217.2006.
2
LPXTG protein InlJ, a newly identified internalin involved in Listeria monocytogenes virulence.LPXTG蛋白InlJ，一种新发现的与单核细胞增生李斯特菌毒力相关的内化素。
Infect Immun. 2005 Oct;73(10):6912-22. doi: 10.1128/IAI.73.10.6912-6922.2005.
3
Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies.投影仪2：用于原核生物基因组序列组装高效填补缺口的重叠群映射。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W560-6. doi: 10.1093/nar/gki356.
4
Listeria monocytogenes virulence and pathogenicity, a food safety perspective.从食品安全角度看单核细胞增生李斯特菌的毒力和致病性
J Food Prot. 2002 Nov;65(11):1811-29. doi: 10.4315/0362-028x-65.11.1811.
5
Pathogenicity and production of virulence factors by Listeria monocytogenes isolates from channel catfish.来自斑点叉尾鮰的单核细胞增生李斯特菌分离株的致病性及毒力因子产生情况
J Food Prot. 2000 May;63(5):613-9. doi: 10.4315/0362-028x-63.5.613.
6
The gene cluster inlC2DE of Listeria monocytogenes contains additional new internalin genes and is important for virulence in mice.单核细胞增生李斯特菌的基因簇inlC2DE包含额外的新内化素基因，对小鼠的毒力很重要。
Mol Gen Genet. 1998 Nov;260(2-3):144-58. doi: 10.1007/s004380050880.
7
A new PrfA-regulated gene of Listeria monocytogenes encoding a small, secreted protein which belongs to the family of internalins.一种新的单核细胞增生李斯特菌PrfA调控基因，其编码一种属于内化素家族的小分泌蛋白。
Mol Microbiol. 1996 Aug;21(4):823-37. doi: 10.1046/j.1365-2958.1996.541414.x.
Zotero 插件