Kuznetsova S A, Ivanovskaia M G, Shabarova Z A
Bioorg Khim. 1990 Feb;16(2):219-25.
An effective synthesis of oligodeoxyribonucleotides containing a substituted pyrophosphate bond in the definite position of the sugar-phosphate backbone has been developed by template-directed condensation of two heptanucleotides. One of them containing 5'-phosphate group to be activated and 3'-phosphate group of the other being substituted with ethoxy-, buthylamino-, morpholino- or ethyl glycinate residues. Water-soluble carbodiimide (EDAC) proved to be more efficient in the phosphate group activation than N-hydroxybenzotriazole ester (yields of substituted pyrophosphates 35-80 and 10-15% respectively). The substituted pyrophosphate bong is quite stable in neutral aqueous solution. Mild conditions of selective cleavage of this bond yielding the initial oligonucleotides were found.
通过两个七核苷酸的模板导向缩合反应,已开发出一种在糖-磷酸主链特定位置含有取代焦磷酸键的寡脱氧核糖核苷酸的有效合成方法。其中一个含有待活化的5'-磷酸基团,另一个的3'-磷酸基团被乙氧基、丁基氨基、吗啉代或甘氨酸乙酯残基取代。水溶性碳二亚胺(EDAC)在磷酸基团活化方面比N-羟基苯并三唑酯更有效(取代焦磷酸的产率分别为35-80%和10-15%)。取代焦磷酸键在中性水溶液中相当稳定。已发现温和的条件可选择性切割该键,从而得到初始寡核苷酸。