• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基因组特异性 SCAR 标记有助于解决分类学问题:以野芥菜(十字花科芸薹属)为例。

Genome-specific SCAR markers help solve taxonomy issues: a case study with Sinapis arvensis (Brassiceae, Brassicaceae).

机构信息

Institute of Agricultural Biotechnology, 42 Timiryazevskaya ul., 127550 Moscow, Russia.

出版信息

Am J Bot. 2011 Mar;98(3):e54-7. doi: 10.3732/ajb.1000422. Epub 2011 Mar 8.

DOI:10.3732/ajb.1000422
PMID:21613124
Abstract

PREMISE OF THE STUDY

Traditional taxonomy and nomenclature of Brassiceae (Brassicaceae) species do not reflect their phylogeny. Revision of the species and generic limits supported by extensive molecular data seems crucial.

METHODS AND RESULTS

Genome-specific polymorphisms extracted from non-coding and coding sequences were used to develop 14 sequence characterized amplified region (SCAR) markers specific for the Brassica B genome. These SCARs were verified against 77 accessions of six U-triangle Brassica species and used to screen 23 accessions of seven wild Brassiceae species to test for their cross-species amplification. SCARs were found in all B-genome Brassica species and also in Sinapis arvensis.

CONCLUSIONS

SCAR markers can be employed for discerning B-genome chromosomes in Brassica species and S. arvensis to reliably identify B-genome species and their natural hybrids. The combined molecular evidence supports the suggestion to revise the generic limits of Brassica and Sinapis.

摘要

研究前提

传统的芸薹属(十字花科)物种分类和命名法不能反映其系统发育。修订由广泛的分子数据支持的物种和属的界限似乎至关重要。

方法和结果

从非编码和编码序列中提取的基因组特异性多态性用于开发 14 个序列特征扩增区域(SCAR)标记,这些标记特异性针对芸薹属 B 基因组。这些 SCAR 标记在六个 U 形三角芸薹属物种的 77 个材料上进行了验证,并用于筛选七个野生芸薹属物种的 23 个材料,以测试它们在种间的扩增情况。SCAR 标记在所有 B 基因组芸薹属物种以及白芥中都有发现。

结论

SCAR 标记可用于区分芸薹属物种和白芥中的 B 基因组染色体,以可靠地鉴定 B 基因组物种及其天然杂种。综合分子证据支持修订芸薹属和白芥属的属界限的建议。

相似文献

1
Genome-specific SCAR markers help solve taxonomy issues: a case study with Sinapis arvensis (Brassiceae, Brassicaceae).基因组特异性 SCAR 标记有助于解决分类学问题:以野芥菜(十字花科芸薹属)为例。
Am J Bot. 2011 Mar;98(3):e54-7. doi: 10.3732/ajb.1000422. Epub 2011 Mar 8.
2
Sinapis genomes provide insights into whole-genome triplication and divergence patterns within tribe Brassiceae.芥菜基因组为芸苔族全基因组三倍化及分化模式研究提供了见解。
Plant J. 2023 Jan;113(2):246-261. doi: 10.1111/tpj.16043. Epub 2022 Dec 16.
3
Comparative genomic in situ hybridization (cGISH) analysis of the genomic relationships among Sinapis arvensis, Brassica rapa and Brassica nigra.比较基因组原位杂交(cGISH)分析野芥菜、油菜和黑芥之间的基因组关系。
Hereditas. 2012 Jun;149(3):86-90. doi: 10.1111/j.1601-5223.2012.02248.x. Epub 2012 Jul 4.
4
Sinapis phylogeny and evolution of glucosinolates and specific nitrile degrading enzymes.白芥系统发育以及硫代葡萄糖苷和特定腈降解酶的进化
Phytochemistry. 2008 Dec;69(17):2937-49. doi: 10.1016/j.phytochem.2008.08.014. Epub 2008 Nov 6.
5
Development of genome-specific 5S rDNA markers in Brassica and related species for hybrid testing.甘蓝型油菜及其近缘种基因组特异 5S rDNA 标记的开发及其杂种鉴定。
Genome. 2010 Aug;53(8):643-9. doi: 10.1139/g10-033.
6
The mosaic of ancestral karyotype blocks in the Sinapis alba L. genome.甘蓝型油菜基因组中祖先染色体块的镶嵌。
Genome. 2011 Jan;54(1):33-41. doi: 10.1139/G10-097.
7
The complete chloroplast genome sequence of yellow mustard (Sinapis alba L.) and its phylogenetic relationship to other Brassicaceae species.黄花芥(Sinapis alba L.)完整叶绿体基因组序列及其与其他十字花科物种的系统发育关系。
Gene. 2020 Mar 20;731:144340. doi: 10.1016/j.gene.2020.144340. Epub 2020 Jan 7.
8
Seed coat microsculpturing is related to genomic components in wild Brassica juncea and Sinapis arvensis.种皮微雕与野生芥菜和芝麻的基因组成分有关。
PLoS One. 2013 Dec 30;8(12):e83634. doi: 10.1371/journal.pone.0083634. eCollection 2013.
9
Plastid genome characterisation in Brassica and Brassicaceae using a new set of nine SSRs.利用一组新的9个简单重复序列对芸苔属和十字花科植物的质体基因组进行特征分析。
Theor Appl Genet. 2006 Nov;113(7):1221-31. doi: 10.1007/s00122-006-0377-0. Epub 2006 Aug 15.
10
Effect of water stress on the agressiveness of oilsseed rape (Brassica napus L.) and two mustards (Sinapis alba L. and S. arvensis L.).水分胁迫对油菜(甘蓝型油菜)以及两种芥菜(白芥和田野芥)侵染力的影响。
Commun Agric Appl Biol Sci. 2003;68(4 Pt A):433-40.

引用本文的文献

1
Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species.比较分析芸薹属二倍体和双二倍体中细胞分裂素反应因子,并深入了解芸薹属物种的进化。
BMC Genomics. 2018 Oct 3;19(1):728. doi: 10.1186/s12864-018-5114-y.
2
SCAR Marker for Identification and Discrimination of Commiphora wightii and C. myrrha.用于鉴定和区分没药树和没药的SCAR标记
Mol Biol Int. 2016;2016:1482796. doi: 10.1155/2016/1482796. Epub 2016 Mar 16.
3
Deep RNA-Seq to unlock the gene bank of floral development in Sinapis arvensis.
深度RNA测序以解锁野芥菜花卉发育的基因库。
PLoS One. 2014 Sep 5;9(9):e105775. doi: 10.1371/journal.pone.0105775. eCollection 2014.
4
Seed coat microsculpturing is related to genomic components in wild Brassica juncea and Sinapis arvensis.种皮微雕与野生芥菜和芝麻的基因组成分有关。
PLoS One. 2013 Dec 30;8(12):e83634. doi: 10.1371/journal.pone.0083634. eCollection 2013.