Department of Chemistry, Zhengzhou University, Zhengzhou, Henan Province 450001, People's Republic of China.
J Mol Model. 2012 Mar;18(3):851-8. doi: 10.1007/s00894-011-1119-z. Epub 2011 May 28.
Cyclic peptides are exciting novel hosts for chiral and molecular recognition. In this work, the inclusion complexes of cyclic decapeptide (CDP) with the 1-phenyl-1-propanol enantiomers (E-PP) are firstly studied using the density functional theory (DFT) B3LYP method. Our calculated results indicated that S(-)-1-phenyl-1-propanol (S-PP) could form a more stable inclusion complex with CDP than that of R(+)-1-phenyl-1-propanol (R-PP). The obvious differences in binding energy and thermodynamics data suggest that the cyclic decapeptide could differentiate the two enantiomers. Furthermore, molecular dynamics simulation results have supported the conclusions obtained by DFT. The current investigation shows that cyclic peptide is a desirable host molecule for chiral and molecular recognition.
环肽是一类令人兴奋的新型手性和分子识别主体。在这项工作中,我们首次使用密度泛函理论(DFT)B3LYP 方法研究了环十肽(CDP)与 1-苯基-1-丙醇对映体(E-PP)的包合复合物。我们的计算结果表明,S-(-)-1-苯基-1-丙醇(S-PP)与 CDP 形成的包合物比 R-(+)-1-苯基-1-丙醇(R-PP)更稳定。结合能和热力学数据的明显差异表明,环十肽可以区分这两种对映体。此外,分子动力学模拟结果也支持了 DFT 的结论。目前的研究表明,环肽是一种理想的手性和分子识别主体分子。