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基于亲和力的扩增病毒DNA收集:应用于1型人类免疫缺陷病毒、人巨细胞病毒和16型人乳头瘤病毒的检测

Affinity-based collection of amplified viral DNA: application to the detection of human immunodeficiency virus type 1, human cytomegalovirus and human papillomavirus type 16.

作者信息

Harju L, Jänne P, Kallio A, Laukkanen M L, Lautenschlager I, Mattinen S, Ranki A, Ranki M, Soares V R, Söderlund H

机构信息

Orion Pharmaceutica, Biotechnology, Helsinki, Finland.

出版信息

Mol Cell Probes. 1990 Jun;4(3):223-35. doi: 10.1016/0890-8508(90)90056-6.

DOI:10.1016/0890-8508(90)90056-6
PMID:2166237
Abstract

We have devised a sensitive and convenient hybridization technique by combining the polymerase chain reaction (PCR) with affinity-based hybrid collection. In this method 5'-biotinylated primers are used to introduce biotin residues into the DNA fragments during the amplification. The amplified DNA fragments are detected by liquid hybridization using a 32P- or 35S-labelled oligonucleotide as probe. For measurement the hybrids are collected on polystyrene microparticles or onto microtitre wells taking advantage of the biotinavidin interaction. The method is highly sensitive allowing the detection of 30 molecules of DNA. It involves few and simple operations, and is thus suitable for routine diagnostics. The applicability of the method to the detection of HIV-1 DNA from blood, HCMV DNA from urine and HPV-16 DNA from cervical scrapes was evaluated.

摘要

我们通过将聚合酶链反应(PCR)与基于亲和的杂交捕获相结合,设计出了一种灵敏且便捷的杂交技术。在该方法中,5'-生物素化引物用于在扩增过程中将生物素残基引入DNA片段。扩增的DNA片段通过使用32P或35S标记的寡核苷酸作为探针的液相杂交进行检测。为了进行测量,利用生物素-抗生物素蛋白相互作用,将杂交体收集在聚苯乙烯微粒或微量滴定板上。该方法高度灵敏,能够检测到30个DNA分子。它涉及的操作很少且简单,因此适用于常规诊断。评估了该方法在检测血液中的HIV-1 DNA、尿液中的HCMV DNA和宫颈刮片中的HPV-16 DNA方面的适用性。

相似文献

1
Affinity-based collection of amplified viral DNA: application to the detection of human immunodeficiency virus type 1, human cytomegalovirus and human papillomavirus type 16.基于亲和力的扩增病毒DNA收集:应用于1型人类免疫缺陷病毒、人巨细胞病毒和16型人乳头瘤病毒的检测
Mol Cell Probes. 1990 Jun;4(3):223-35. doi: 10.1016/0890-8508(90)90056-6.
2
Sensitivity of in situ hybridization techniques using biotin- and 35S-labeled human papillomavirus (HPV) DNA probes.使用生物素和35S标记的人乳头瘤病毒(HPV)DNA探针的原位杂交技术的敏感性
J Virol Methods. 1988 Mar-Apr;19(3-4):225-38. doi: 10.1016/0166-0934(88)90017-1.
3
Evaluation of immunoassays for the detection and typing of PCR amplified human papillomavirus DNA.用于检测和分型聚合酶链反应扩增的人乳头瘤病毒DNA的免疫测定法评估
J Clin Pathol. 1998 Feb;51(2):143-8. doi: 10.1136/jcp.51.2.143.
4
Fast solid support detection of human papillomavirus in in vitro amplified DNA using a DNP-anti DNP monoclonal antibody couple.使用二硝基苯(DNP)-抗DNP单克隆抗体对在体外扩增的DNA中快速进行人乳头瘤病毒的固相支持物检测。
J Virol Methods. 1994 Jan;46(1):29-38. doi: 10.1016/0166-0934(94)90014-0.
5
Evaluation of infection with human immunodeficiency virus type 1 by using nonisotopic solution hybridization for detection of polymerase chain reaction-amplified proviral DNA.
J Clin Microbiol. 1991 Nov;29(11):2461-7. doi: 10.1128/jcm.29.11.2461-2467.1991.
6
Polymerase chain reaction for producing biotinylated human papillomavirus DNA probes for in situ hybridization.
Sex Transm Dis. 1992 May-Jun;19(3):140-5. doi: 10.1097/00007435-199205000-00006.
7
Quantification of polymerase chain reaction products by affinity-based hybrid collection.基于亲和的杂交捕获法对聚合酶链反应产物进行定量分析。
Nucleic Acids Res. 1988 Dec 9;16(23):11327-38. doi: 10.1093/nar/16.23.11327.
8
Sensitive and quantitative detection of PCR-amplified HIV-1 DNA products by an enzyme linked immunoassay following solution hybridization with two differently labelled oligonucleotide probes.通过与两种不同标记的寡核苷酸探针进行溶液杂交后,采用酶联免疫测定法对PCR扩增的HIV-1 DNA产物进行灵敏且定量的检测。
Mol Cell Probes. 1993 Oct;7(5):361-71. doi: 10.1006/mcpr.1993.1054.
9
The use of polymerase chain reaction in generation of biotinylated human papillomavirus DNA probes for in situ hybridization.
J Virol Methods. 1991 Feb-Mar;31(2-3):147-59. doi: 10.1016/0166-0934(91)90153-q.
10
Enzymatic amplification of human cytomegalovirus sequences by polymerase chain reaction.通过聚合酶链反应对人巨细胞病毒序列进行酶促扩增。
J Clin Microbiol. 1989 Aug;27(8):1802-9. doi: 10.1128/jcm.27.8.1802-1809.1989.

引用本文的文献

1
Infection and cervical neoplasia: facts and fiction.感染与宫颈肿瘤:事实与假象
Int J Clin Exp Pathol. 2009;2(1):48-64. Epub 2008 Apr 28.
2
Use of AffiProbe HPV test kit for detection of human papillomavirus DNA in genital scrapes.使用AffiProbe人乳头瘤病毒检测试剂盒检测生殖器刮片中的人乳头瘤病毒DNA。
J Clin Microbiol. 1990 Sep;28(9):2076-81. doi: 10.1128/jcm.28.9.2076-2081.1990.