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水中铜绿假单胞菌的分子检测。

Molecular detection of Pseudomonas aeruginosa in recreational water.

机构信息

Dipartimento di Scienze Biomolecolari, Università degli Studi di Urbino Carlo Bo, Urbino, Italy.

出版信息

Int J Environ Health Res. 2012;22(1):60-70. doi: 10.1080/09603123.2011.588325. Epub 2011 Jun 13.

Abstract

The aim of this study was the development of a new molecular assay for Pseudomonas aeruginosa identification in recreational water. The method includes bacterial cell concentration through membrane filtration, a short (6 h) culture-enrichment step, DNA extraction and its amplification through a Real-Time PCR assay. The performance of the molecular approach was evaluated on 44 samples of swimming pool water and compared with the reference method UNI EN ISO 16266:2008. Positivity rates of 6% and 74% in pool and inlet water, respectively, with the standard culture method, and of 23% and 74% with the molecular method were found. Statistical analysis indicated "substantial agreement" (Cohen's Kappa index: 0.6831) between the two approaches. RAPD typing of P. aeruginosa isolates showed identical fingerprint profiles, indicating their epidemiological correlation. The developed protocol showed very high specificity and a detection limit of 10 genomic units. This technique has the potential to screen large numbers of environmental samples, and could be proposed as part of a self-monitoring plan for recreational facilities, improving surveillance and early warning systems.

摘要

本研究旨在开发一种新的分子检测方法,用于鉴定休闲水中的铜绿假单胞菌。该方法包括通过膜过滤浓缩细菌细胞,进行短时间(6 小时)的培养富集步骤,以及通过实时 PCR 检测进行 DNA 提取和扩增。该分子方法的性能在 44 个游泳池水样中进行了评估,并与参考方法 UNI EN ISO 16266:2008 进行了比较。标准培养方法在游泳池水和进水口中的阳性率分别为 6%和 74%,而分子方法的阳性率分别为 23%和 74%。统计学分析表明,两种方法之间存在“高度一致性”(科恩氏kappa 指数:0.6831)。对铜绿假单胞菌分离株的 RAPD 分型显示出相同的指纹图谱,表明其具有流行病学相关性。所开发的方案显示出非常高的特异性和 10 个基因组单位的检测限。该技术有可能筛选大量的环境样本,并可作为休闲设施自我监测计划的一部分,以改善监测和预警系统。

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