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采用转座子辅助捕获(TRACA)从与牙周病相关的人牙菌斑中分离细菌染色体外 DNA。

Isolation of bacterial extrachromosomal DNA from human dental plaque associated with periodontal disease, using transposon-aided capture (TRACA).

机构信息

Research Department of Microbial Diseases, UCL Eastman Dental Institute, University College London, London, UK.

出版信息

FEMS Microbiol Ecol. 2011 Nov;78(2):349-54. doi: 10.1111/j.1574-6941.2011.01166.x. Epub 2011 Jul 29.

DOI:10.1111/j.1574-6941.2011.01166.x
PMID:21711368
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3263338/
Abstract

The human oral cavity is host to a complex microbial community estimated to comprise >700 bacterial species, of which at least half are thought to be not yet cultivable in vitro. To investigate the plasmids present in this community, we used a transposon-aided capture system, which allowed the isolation of plasmids from human oral supra- and subgingival plaque samples. Thirty-two novel plasmids and a circular molecule that could be an integrase-generated circular intermediate were isolated.

摘要

人类口腔是一个复杂的微生物群落的宿主,据估计该群落包含超过 700 种细菌,其中至少有一半被认为是目前还不能在体外培养的。为了研究该群落中存在的质粒,我们使用了转座子辅助捕获系统,该系统允许从人类口腔龈上和龈下菌斑样本中分离质粒。我们共分离到 32 种新型质粒和一种可能是整合酶产生的环形中间产物的环形分子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6d0/3263338/d70e17ce4fa9/fem0523-0349-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6d0/3263338/d70e17ce4fa9/fem0523-0349-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6d0/3263338/d70e17ce4fa9/fem0523-0349-f1.jpg

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本文引用的文献

1
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J Basic Microbiol. 2011 Aug;51(4):442-6. doi: 10.1002/jobm.201000372. Epub 2011 Feb 7.
2
The human oral microbiome.人类口腔微生物组。
J Bacteriol. 2010 Oct;192(19):5002-17. doi: 10.1128/JB.00542-10. Epub 2010 Jul 23.
3
A modular master on the move: the Tn916 family of mobile genetic elements.移动中的模块化主基因:Tn916 移动遗传元件家族
质粒检测、特征分析与生态。
Microbiol Spectr. 2015 Feb;3(1):PLAS-0038-2014. doi: 10.1128/microbiolspec.PLAS-0038-2014.
4
Strategies and approaches in plasmidome studies-uncovering plasmid diversity disregarding of linear elements?质粒组研究中的策略与方法——忽视线性元件来揭示质粒多样性?
Front Microbiol. 2015 May 26;6:463. doi: 10.3389/fmicb.2015.00463. eCollection 2015.
5
An improved method for including upper size range plasmids in metamobilomes.一种将更大尺寸范围质粒纳入宏移动基因组的改进方法。
PLoS One. 2014 Aug 12;9(8):e104405. doi: 10.1371/journal.pone.0104405. eCollection 2014.
6
Functional metagenomics for the investigation of antibiotic resistance.功能宏基因组学在抗生素耐药性研究中的应用。
Virulence. 2014 Apr 1;5(3):443-7. doi: 10.4161/viru.28196. Epub 2014 Feb 20.
7
Metagenomics and novel gene discovery: promise and potential for novel therapeutics.宏基因组学和新基因发现:新型治疗药物的前景和潜力。
Virulence. 2014 Apr 1;5(3):399-412. doi: 10.4161/viru.27208. Epub 2013 Apr 1.
8
The rumen plasmidome: A genetic communication hub for the rumen microbiome.瘤胃质粒组:瘤胃微生物群的遗传通讯枢纽。
Mob Genet Elements. 2012 May 1;2(3):152-153. doi: 10.4161/mge.20793.
9
Evolutionary, ecological and biotechnological perspectives on plasmids resident in the human gut mobile metagenome.关于人类肠道移动宏基因组中质粒的进化、生态和生物技术视角。
Bioeng Bugs. 2012 Jan 1;3(1):13-31. doi: 10.4161/bbug.3.1.17883.
Trends Microbiol. 2009 Jun;17(6):251-8. doi: 10.1016/j.tim.2009.03.002. Epub 2009 May 20.
4
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Nature. 2008 Apr 3;452(7187):629-32. doi: 10.1038/nature06810. Epub 2008 Mar 12.
5
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6
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7
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Periodontol 2000. 2006;42:80-7. doi: 10.1111/j.1600-0757.2006.00174.x.
8
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Plasmid. 2004 Jan;51(1):61-5. doi: 10.1016/j.plasmid.2003.11.002.
9
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Rev Inst Med Trop Sao Paulo. 2003 Jan-Feb;45(1):5-9. doi: 10.1590/s0036-46652003000100002.
10
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FEMS Microbiol Lett. 2003 Apr 11;221(1):1-6. doi: 10.1016/S0378-1097(03)00125-3.