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从盐湖土壤中分离的芽孢杆菌 HKG112 受到γ射线照射时蛋白质表达的全局变化的蛋白质组学分析。

Proteomic analysis of global changes in protein expression during exposure of gamma radiation in Bacillus sp. HKG 112 isolated from saline soil.

机构信息

Division of Comparative Genomics, Institute of Genomics and Integrative Biology, Mall Road, New Delhi, India.

出版信息

J Microbiol Biotechnol. 2011 Jun;21(6):574-81.

Abstract

A Gram-positive bacterium was isolated from the saline soils of Jangpura (U.P.), India, and showed high-level of radiation-resistant property and survived upto 12.5 kGy dose of gamma radiation. The 16S rDNA sequence of this strain was examined, identified as Bacillus sp. strain HKG 112, and was submitted to the NCBI GenBank (Accession No. GQ925432). The mechanism of radiation resistance and gene level expression were examined by proteomic analysis of whole-cell extract. Two proteins, 38 kDa and 86.5 kDa excised from SDS-PAGE, which showed more significant changes after radiation exposure, were identified by MALDI-TOF as being flagellin and S-layer protein, respectively. Twenty selected 2-DE protein spots from the crude extracts of Bacillus sp. HKG 112, excised from 2- DE, were identified by liquid chromatography mass spectrometry (LC-MS) out of which 16 spots showed significant changes after radiation exposure and might be responsible for the radiation resistance property. Our results suggest that the different responses of some genes under radiation for the expression of radiation-dependent proteins could contribute to a physiological advantage and would be a significant initial step towards a full-system understanding of the radiation stress protection mechanisms of bacteria in different environments.

摘要

从印度詹普尔(北方邦)的盐土中分离出一株革兰氏阳性细菌,该菌具有高水平的辐射抗性,在 12.5kGy 的γ射线剂量下仍能存活。对该菌株的 16S rDNA 序列进行了检测,鉴定为芽孢杆菌属菌株 HKG 112,并提交给 NCBI GenBank(登录号 GQ925432)。通过全细胞提取物的蛋白质组分析研究了辐射抗性的机制和基因水平表达。从 SDS-PAGE 中切下的两种蛋白质,分子量为 38kDa 和 86.5kDa,经 MALDI-TOF 鉴定分别为鞭毛蛋白和 S-层蛋白,这两种蛋白质在辐射暴露后显示出更显著的变化。从芽孢杆菌属 HKG 112 的粗提物中选择了 20 个 2-DE 蛋白斑点,从 2-DE 中切下,通过液相色谱-质谱(LC-MS)鉴定,其中 16 个斑点在辐射暴露后显示出明显的变化,可能与辐射抗性有关。我们的结果表明,不同基因在辐射下的不同反应可能导致辐射依赖蛋白的表达,从而为细菌在不同环境中的辐射应激保护机制的全面理解提供了一个重要的初始步骤。

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