Karelina T A, Ma H, Goryanin I, Demin O V
Physics Department, Moscow State University, Moscow 119991, Leninskie Gory, Russia.
J Biophys. 2011;2011:579402. doi: 10.1155/2011/579402. Epub 2011 Mar 20.
The mathematical model of the operation of the first enzyme of the Escherichia coli phosphotransferase system, EI, is proposed. Parameters of the kinetic model describing the operation of EI under different conditions are identified on the basis of a large amount of known experimental data. The verified model is employed to predict modes of operation of EI under both in vivo physiological conditions and in vitro nonphysiological conditions. The model predicts that under in vivo physiological conditions, the rate of phosphotransfer from EI to the second protein of the phosphotransferase system HPr by the dimer is much higher than by the monomer. A hypothesis is proposed on the basis of calculations that the transfer by a monomer plays a role in the regulation of chemotaxis. At submicromolar pyruvate concentration, the model predicts nonmonotonic dependence of the phosphotransfer rate on the substrate (PEP) concentration.
提出了大肠杆菌磷酸转移酶系统第一种酶EI的操作数学模型。基于大量已知实验数据,确定了描述EI在不同条件下操作的动力学模型参数。经验证的模型用于预测EI在体内生理条件和体外非生理条件下的操作模式。该模型预测,在体内生理条件下,二聚体将磷酸从EI转移到磷酸转移酶系统HPr的第二种蛋白质的速率远高于单体。基于计算提出了一个假设,即单体转移在趋化性调节中起作用。在亚微摩尔丙酮酸浓度下,该模型预测磷酸转移速率对底物(PEP)浓度呈非单调依赖性。