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利用蛋白质组学技术揭示甲醇胁迫下普通章鱼视神经节的差异蛋白质。

Differential proteins of the optic ganglion in octopus vulgaris under methanol stress revealed using proteomics.

机构信息

Department of Biochemistry and Biotechnology, School of Life Sciences, Xiamen University, Xiamen 361005, China.

出版信息

Appl Biochem Biotechnol. 2011 Oct;165(3-4):978-88. doi: 10.1007/s12010-011-9313-0. Epub 2011 Jul 5.

Abstract

An analytical approach using the two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) technique separated the proteome from the optic ganglia of Octopus vulgaris (OVOG). Approximately 600 protein spots were detected from the extraction when applying 150 μg protein to a 2D-PAGE gel in the pH range 5.0-8.0. Compared to the control, significant changes of 18 protein spots were observed in OVOG under the stress of native seawater containing 2% methanol for 72 h. Among these spots, we found that eight were down-regulated and ten were up-regulated in the gels, which were further identified using both peptide mass fingerprinting and database searches. Significant proteins such as glyceraldehyde-3-phosphate dehydrogenase, alpha subunit of succinyl-CoA synthetase, alcohol dehydrogenase, and long-chain specific acyl-CoA dehydrogenase were up-regulated proteins, whereas putative ABC transporter was a down -regulated protein. These differential proteins at the level of subcellular localization were further classified using LOCtree software with a hierarchical system of support vector machines. We found that most of the differential proteins in the gel could be identified as mitochondrial proteins, suggesting that these protective or marker proteins might help to prevent methanol poisoning via the mitochondria in the optical ganglia. The results indicated that both beta-tubulin and beta-actin were potential biomarkers as up-regulated proteins for monitoring methanol toxicosis associated with fish foods such as octopus and shark.

摘要

采用二维聚丙烯酰胺凝胶电泳(2D-PAGE)技术的分析方法分离了普通章鱼(OVOG)视神经节的蛋白质组。当将 150μg 蛋白质应用于 pH 值为 5.0-8.0 的 2D-PAGE 凝胶时,从提取物中检测到约 600 个蛋白质斑点。与对照相比,在含有 2%甲醇的天然海水中应激 72 小时后,OVOG 中的 18 个蛋白质斑点发生了明显变化。在这些斑点中,我们发现凝胶中有 8 个下调和 10 个上调,使用肽质量指纹图谱和数据库搜索进一步鉴定。上调的显著蛋白如甘油醛-3-磷酸脱氢酶、琥珀酰辅酶 A 合成酶的α亚基、醇脱氢酶和长链特异性酰基辅酶 A 脱氢酶,而假定的 ABC 转运蛋白是下调蛋白。使用 LOCtree 软件和支持向量机的分层系统,进一步对这些亚细胞定位水平的差异蛋白进行分类。我们发现凝胶中的大多数差异蛋白可鉴定为线粒体蛋白,表明这些保护或标记蛋白可能有助于通过视神经节中的线粒体预防甲醇中毒。结果表明,β-微管蛋白和β-肌动蛋白均作为上调蛋白作为监测与章鱼和鲨鱼等鱼类食物相关的甲醇中毒的潜在生物标志物。

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