Instituto de Investigaciones Marinas (IIM), CSIC, Eduardo Cabello 6, 36208 Vigo, Spain.
Int J Mol Sci. 2023 Apr 12;24(8):7145. doi: 10.3390/ijms24087145.
The common octopus is a cephalopod species subject to active fisheries, with great potential in the aquaculture and food industry, and which serves as a model species for biomedical and behavioral studies. The analysis of the skin mucus allows us to study their health in a non-invasive way, by using a hardly exploited discard of octopus in the fishing sector. A shotgun proteomics approach combined with liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) using an Orbitrap-Elite instrument was used to create a reference dataset from octopus skin mucus. The final proteome compilation was investigated by integrated in-silico studies, including Gene Ontology (GO), the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, network studies, and prediction and characterization analysis of potential bioactive peptides. This work presents the first proteomic analysis of the common octopus skin mucus proteome. This library was created by merging 5937 identified spectra of 2038 different peptides. A total of 510 non-redundant proteins were identified. Obtained results show proteins closely related to the defense, which highlight the role of skin mucus as the first barrier of defense and the interaction with the environment. Finally, the potential of the bioactive peptides with antimicrobial properties, and their possible application in biomedicine, pharmaceutical, and nutraceutical industry was addressed.
普通章鱼是一种头足类物种,受到积极捕捞,在水产养殖和食品工业中有很大的潜力,并且是生物医学和行为研究的模式物种。通过使用渔业中很少利用的章鱼废弃品,对皮肤黏液进行分析可以实现对其健康状况进行非侵入性研究。本研究采用组合式 shotgun 蛋白质组学方法,结合液相色谱串联质谱(LC-MS/MS)联用轨道阱 Elite 仪器,从章鱼皮肤黏液中创建参考数据集。通过综合的计算机模拟研究,包括基因本体论(GO)、京都基因与基因组百科全书(KEGG)通路、网络研究以及对潜在生物活性肽的预测和特征分析,对最终的蛋白质组进行了调查。本工作首次对普通章鱼皮肤黏液蛋白质组进行了蛋白质组学分析。该文库是通过合并 5937 个不同肽段的 2038 个鉴定谱而创建的。共鉴定出 510 种非冗余蛋白质。获得的结果表明,这些蛋白质与防御密切相关,突出了皮肤黏液作为第一道防御屏障的作用以及与环境的相互作用。最后,还探讨了具有抗菌特性的生物活性肽的潜力及其在生物医学、制药和营养保健品行业的可能应用。