Suppr超能文献

一步法逆转录环介导等温扩增技术用于检测传染性法氏囊病病毒

One-step reverse-transcription loop-mediated isothermal amplification for detection of infectious bursal disease virus.

作者信息

Lee Meng-Shiou, Lin Yi-Chiu, Lai Guan-Hua, Lai Su-Yaun, Chen Hsi-Jien, Wang Min-Ying

机构信息

School of Chinese Medicine Resources, China Medical University, No. 91, Hseuh-shih Road, Taichung, Taiwan 40402.

出版信息

Can J Vet Res. 2011 Apr;75(2):122-7.

Abstract

A fast, sensitive, and specific reverse-transcription (RT) loop-mediated isothermal amplification (RT-LAMP) assay was developed that involved a single tube and a 1-step reaction for detecting infectious bursal disease virus (IBDV). Four specific primers were used for amplification of the VP2 gene of IBDV. The amplified LAMP products were detected by DNA electrophoresis and by direct observation with the naked eye in the presence of SYBR Green I. The sensitivity of RT-LAMP was determined to be 0.01 fg of IBDV viral RNA. This assay for IBDV is more sensitive than the conventional RT-polymerase chain reaction assay, which has a detection limit of 1 ng. The LAMP assay was also assessed for specificity and was found to precisely discriminate between positive and negative test samples. This newly established LAMP assay, combined with RT, is a practical diagnostic tool because IBDV-infected and uninfected clinical samples collected from an experimental farm could be discriminated. Full verification of a sample's IBDV status was obtained within 40 min of extraction of the viral RNA, which could then be directly added to the RT-LAMP reaction mixture.

摘要

开发了一种快速、灵敏且特异的逆转录(RT)环介导等温扩增(RT-LAMP)检测方法,该方法采用单管一步反应来检测传染性法氏囊病病毒(IBDV)。使用四条特异性引物扩增IBDV的VP2基因。扩增的LAMP产物通过DNA电泳以及在SYBR Green I存在下肉眼直接观察进行检测。RT-LAMP的灵敏度确定为0.01 fg的IBDV病毒RNA。该IBDV检测方法比传统RT聚合酶链反应检测方法更灵敏,传统方法的检测限为1 ng。还对LAMP检测方法的特异性进行了评估,发现其能够准确区分阳性和阴性测试样品。这种新建立的结合RT的LAMP检测方法是一种实用的诊断工具,因为可以区分从实验农场收集的感染IBDV和未感染IBDV的临床样品。在提取病毒RNA后40分钟内即可完成对样品IBDV状态的全面验证,然后可将提取的病毒RNA直接添加到RT-LAMP反应混合物中。

相似文献

3
Development of reverse-transcription loop-mediated isothermal amplification for the detection of infectious bursal disease virus.
J Virol Methods. 2009 Dec;162(1-2):267-71. doi: 10.1016/j.jviromet.2009.07.010. Epub 2009 Jul 28.
6
One-step RT-PCR for the detection of infectious bursal disease virus in clinical samples.
Vet Res Commun. 2001 Jul;25(5):429-36. doi: 10.1023/a:1010607229688.
8
Development of an RT-qPCR assay for the specific detection of a distinct genetic lineage of the infectious bursal disease virus.
Avian Pathol. 2017 Apr;46(2):150-156. doi: 10.1080/03079457.2016.1228827. Epub 2016 Dec 7.

引用本文的文献

2
Diagnosis of COVID-19 for controlling the pandemic: A review of the state-of-the-art.
Biosens Bioelectron. 2021 Feb 15;174:112830. doi: 10.1016/j.bios.2020.112830. Epub 2020 Nov 27.
3
Limited reverse transcriptase activity of phi29 DNA polymerase.
Nucleic Acids Res. 2018 Apr 20;46(7):3625-3632. doi: 10.1093/nar/gky190.
4
Prevention and Control Strategies to Counter ZIKA Epidemic.
Front Microbiol. 2017 Feb 28;8:305. doi: 10.3389/fmicb.2017.00305. eCollection 2017.

本文引用的文献

1
Development and evaluation of a loop-mediated isothermal amplification assay for rapid detection of chicken anaemia virus.
J Appl Microbiol. 2010 Mar;108(3):917-924. doi: 10.1111/j.1365-2672.2009.04481.x. Epub 2009 Jul 20.
2
Development of reverse-transcription loop-mediated isothermal amplification for the detection of infectious bursal disease virus.
J Virol Methods. 2009 Dec;162(1-2):267-71. doi: 10.1016/j.jviromet.2009.07.010. Epub 2009 Jul 28.
3
Sensitive and rapid detection of infectious pancreatic necrosis virus by reverse transcription loop mediated isothermal amplification.
J Virol Methods. 2009 Jun;158(1-2):77-83. doi: 10.1016/j.jviromet.2009.01.018. Epub 2009 Jan 30.
4
Loop-mediated isothermal amplification (LAMP): a rapid, accurate, and cost-effective diagnostic method for infectious diseases.
J Infect Chemother. 2009 Apr;15(2):62-9. doi: 10.1007/s10156-009-0669-9. Epub 2009 Apr 25.
6
Rapid and simple detection of Clostridium botulinum types A and B by loop-mediated isothermal amplification.
J Appl Microbiol. 2009 Apr;106(4):1252-9. doi: 10.1111/j.1365-2672.2008.04084.x. Epub 2009 Jan 30.
7
Development of a loop-mediated isothermal amplification assay for sensitive and rapid detection of Campylobacter fetus.
Vet Microbiol. 2009 May 12;136(3-4):393-6. doi: 10.1016/j.vetmic.2008.11.018. Epub 2008 Dec 3.
8
Development and evaluation of a loop-mediated isothermal amplification method for diagnosis of tropical theileriosis.
Transbound Emerg Dis. 2008 Aug;55(5-6):238-43. doi: 10.1111/j.1865-1682.2008.01033.x.
9
Development and evaluation of a one-step loop-mediated isothermal amplification for detection of spring viraemia of carp virus.
J Appl Microbiol. 2008 Oct;105(4):1220-6. doi: 10.1111/j.1365-2672.2008.03858.x. Epub 2008 Jul 10.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验