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来自接合质粒 F 的 TrbB 是一种结构独特的二硫键异构酶,需要 DsbD 来维持氧化还原状态。

TrbB from conjugative plasmid F is a structurally distinct disulfide isomerase that requires DsbD for redox state maintenance.

机构信息

Department of Biology, The Johns Hopkins University, Baltimore, MD 21218, USA.

出版信息

J Bacteriol. 2011 Sep;193(18):4588-97. doi: 10.1128/JB.00351-11. Epub 2011 Jul 8.

Abstract

TrbB, a periplasmic protein encoded by the conjugative plasmid F, has a predicted thioredoxin-like fold and possesses a C-X-X-C redox active site motif. TrbB may function in the conjugative process by serving as a disulfide bond isomerase, facilitating proper folding of a subset of F-plasmid-encoded proteins in the periplasm. Previous studies have demonstrated that a ΔtrbB F plasmid in Escherichia coli lacking DsbC(E.coli), its native disulfide bond isomerase, experiences a 10-fold decrease in mating efficiency but have not provided direct evidence for disulfide bond isomerase activity. Here we demonstrate that trbB can partially restore transfer of a variant of the distantly related R27 plasmid when both chromosomal and plasmid genes encoding disulfide bond isomerases have been disrupted. In addition, we show that TrbB displays both disulfide bond isomerase and reductase activities on substrates not involved in the conjugative process. Unlike canonical members of the disulfide bond isomerase family, secondary structure predictions suggest that TrbB lacks both an N-terminal dimerization domain and an α-helical domain found in other disulfide bond isomerases. Phylogenetic analyses support the conclusion that TrbB belongs to a unique family of plasmid-based disulfide isomerases. Interestingly, although TrbB diverges structurally from other disulfide bond isomerases, we show that like those isomerases, TrbB relies on DsbD from E. coli for maintenance of its C-X-X-C redox active site motif.

摘要

TrbB,一种由接合质粒 F 编码的周质蛋白,具有预测的硫氧还蛋白样折叠结构,并具有 C-X-X-C 氧化还原活性位点基序。TrbB 可能通过作为二硫键异构酶在接合过程中发挥作用,促进周质中一组 F 质粒编码蛋白的正确折叠。先前的研究表明,大肠杆菌中缺乏其天然二硫键异构酶 DsbC(E.coli)的 ΔtrbB F 质粒的交配效率降低了 10 倍,但没有提供二硫键异构酶活性的直接证据。在这里,我们证明当染色体和质粒基因编码的二硫键异构酶都被破坏时,trbB 可以部分恢复远缘 R27 质粒变体的转移。此外,我们还表明 TrbB 在不参与接合过程的底物上显示出二硫键异构酶和还原酶活性。与二硫键异构酶家族的典型成员不同,二级结构预测表明 TrbB 既缺乏 N 端二聚化结构域,也缺乏其他二硫键异构酶中存在的 α-螺旋结构域。系统发育分析支持 TrbB 属于独特的质粒二硫键异构酶家族的结论。有趣的是,尽管 TrbB 在结构上与其他二硫键异构酶不同,但我们表明,像那些异构酶一样,TrbB 依赖于大肠杆菌中的 DsbD 来维持其 C-X-X-C 氧化还原活性位点基序。

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本文引用的文献

1
Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study.
Lancet Infect Dis. 2010 Sep;10(9):597-602. doi: 10.1016/S1473-3099(10)70143-2. Epub 2010 Aug 10.
2
F plasmid TraF and TraH are components of an outer membrane complex involved in conjugation.
J Bacteriol. 2010 Mar;192(6):1730-4. doi: 10.1128/JB.00726-09. Epub 2010 Jan 15.
3
In vivo oxidative protein folding can be facilitated by oxidation-reduction cycling.
Mol Microbiol. 2010 Jan;75(1):13-28. doi: 10.1111/j.1365-2958.2009.06952.x. Epub 2009 Dec 3.
4
A periplasmic reducing system protects single cysteine residues from oxidation.
Science. 2009 Nov 20;326(5956):1109-11. doi: 10.1126/science.1179557.
5
Conjugative DNA metabolism in Gram-negative bacteria.
FEMS Microbiol Rev. 2010 Jan;34(1):18-40. doi: 10.1111/j.1574-6976.2009.00195.x.
7
The structural biology of type IV secretion systems.
Nat Rev Microbiol. 2009 Oct;7(10):703-14. doi: 10.1038/nrmicro2218.
8
Protein structure prediction on the Web: a case study using the Phyre server.
Nat Protoc. 2009;4(3):363-71. doi: 10.1038/nprot.2009.2.
9
Properties of the thioredoxin fold superfamily are modulated by a single amino acid residue.
J Biol Chem. 2009 Apr 10;284(15):10150-9. doi: 10.1074/jbc.M809509200. Epub 2009 Jan 30.
10
Disulfide bond formation by exported glutaredoxin indicates glutathione's presence in the E. coli periplasm.
Proc Natl Acad Sci U S A. 2009 Feb 3;106(5):1572-7. doi: 10.1073/pnas.0812596106. Epub 2009 Jan 21.

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