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对凡纳滨对虾 ras 样核(Ran)基因的分子分析及其在卵巢不同发育阶段的表达。

Molecular analysis of a ras-like nuclear (Ran) gene from Penaeus monodon and its expression at the different ovarian stages of development.

机构信息

South China Sea Fisheries Research Institute, CAFS, 231 Xingang Road Western, Guangzhou, 510300, Guangdong, China.

出版信息

Mol Biol Rep. 2012 Apr;39(4):3821-7. doi: 10.1007/s11033-011-1160-0. Epub 2011 Jul 12.

Abstract

In the present study, a ras-like nuclear (Ran) gene was obtained from the ovary and neurosecretory organ in eyestalk cDNA library of black tiger prawn (Penaeus monodon). The full-length black tiger prawn Ran (PmRan) cDNA consisted of 1140 nucleotides including an open reading frame (ORF) 648 bp, a 5' untranslated region (5'UTR) of 117 bp and a 3'UTR of 375 bp with a polyadenylation signal sequence "aataaa" and a poly (A) tail. The ORF encoded a peptide of 215 amino acids with molecular mass 24.6 kDa and a theoretical isoelectric point of 7.39. ScanProsite analysis indicated that PmRan protein sequence contained a small GTPase Ran family motif. Homology analysis of the deduced amino acid sequence of the PmRan with other known Ran sequences by MatGAT software revealed that the PmRan show very high homology with the sequences of other animals (92.1-98.6% similarity, 85.6-98.1% identity). Analysis of the tissue expression pattern of the PmRan gene showed that the PmRan mRNA was expressed in all tested tissues, including hepatopancreas, ovary, muscle, intestine, neurosecretory organ in eyestalk, neurosecretory organ in brain, stomach, and heart, with the highest levels in ovary. Furthermore, the PmRan expression was found to be high level in the six ovarian stages of development. The results indicated PmRan might play an important role in ovarian development.

摘要

在本研究中,从黑虎虾(Penaeus monodon)卵巢和眼柄神经分泌器官 cDNA 文库中获得了一个 Ras 样核(Ran)基因。全长黑虎虾 Ran(PmRan)cDNA 由 1140 个核苷酸组成,包括一个开放阅读框(ORF)648bp、一个 5'非翻译区(5'UTR)117bp 和一个 3'UTR 375bp,带有多聚腺苷酸化信号序列“aataaa”和多聚(A)尾。ORF 编码一个 215 个氨基酸的肽,分子量为 24.6kDa,理论等电点为 7.39。ScanProsite 分析表明,PmRan 蛋白序列含有一个小 GTPase Ran 家族基序。MatGAT 软件对 PmRan 的推导氨基酸序列与其他已知 Ran 序列的同源性分析表明,PmRan 与其他动物的序列具有非常高的同源性(92.1-98.6%相似性,85.6-98.1%同一性)。对 PmRan 基因组织表达模式的分析表明,PmRan mRNA 在所有检测到的组织中均有表达,包括肝胰腺、卵巢、肌肉、肠、眼柄神经分泌器官、脑神经分泌器官、胃和心脏,在卵巢中表达水平最高。此外,还发现 PmRan 在六个卵巢发育阶段的表达水平较高。结果表明 PmRan 可能在卵巢发育中发挥重要作用。

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