• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从生物力学过程的亚细胞建模中涌现的细胞和组织动力学。

Emergent cell and tissue dynamics from subcellular modeling of active biomechanical processes.

机构信息

Center for Biological Physics, Department of Physics, Arizona State University, Tempe, AZ 85287, USA.

出版信息

Phys Biol. 2011 Aug;8(4):045007. doi: 10.1088/1478-3975/8/4/045007. Epub 2011 Jul 12.

DOI:10.1088/1478-3975/8/4/045007
PMID:21750367
Abstract

Cells and the tissues they form are not passive material bodies. Cells change their behavior in response to external biochemical and biomechanical cues. Behavioral changes, such as morphological deformation, proliferation and migration, are striking in many multicellular processes such as morphogenesis, wound healing and cancer progression. Cell-based modeling of these phenomena requires algorithms that can capture active cell behavior and their emergent tissue-level phenotypes. In this paper, we report on extensions of the subcellular element model to model active biomechanical subcellular processes. These processes lead to emergent cell and tissue level phenotypes at larger scales, including (i) adaptive shape deformations in cells responding to slow stretching, (ii) viscous flow of embryonic tissues, and (iii) streaming patterns of chemotactic cells in epithelial-like sheets. In each case, we connect our simulation results to recent experiments.

摘要

细胞及其组成的组织并不是被动的物质实体。细胞会根据外部的生化和生物力学线索改变其行为。在形态发生、伤口愈合和癌症进展等许多多细胞过程中,形态变形、增殖和迁移等行为变化非常明显。对这些现象进行基于细胞的建模需要能够捕捉活跃细胞行为及其在组织水平上表现出的表型的算法。在本文中,我们报告了对亚细胞元素模型的扩展,以模拟活跃的生物力学亚细胞过程。这些过程导致更大尺度上的细胞和组织水平的表型出现,包括:(i)细胞对缓慢拉伸的自适应形状变形;(ii)胚胎组织的粘性流动;(iii)上皮样薄片中趋化性细胞的流动模式。在每种情况下,我们将我们的模拟结果与最近的实验联系起来。

相似文献

1
Emergent cell and tissue dynamics from subcellular modeling of active biomechanical processes.从生物力学过程的亚细胞建模中涌现的细胞和组织动力学。
Phys Biol. 2011 Aug;8(4):045007. doi: 10.1088/1478-3975/8/4/045007. Epub 2011 Jul 12.
2
Vertex dynamics simulations of viscosity-dependent deformation during tissue morphogenesis.组织形态发生过程中粘度相关变形的顶点动力学模拟。
Biomech Model Mechanobiol. 2015 Apr;14(2):413-25. doi: 10.1007/s10237-014-0613-5. Epub 2014 Sep 17.
3
Modeling the mechanosensitive collective migration of cells on the surface and the interior of morphing soft tissues.在变形软组织的表面和内部模拟机械敏感的细胞集体迁移。
Biomech Model Mechanobiol. 2024 Dec;23(6):1815-1835. doi: 10.1007/s10237-024-01870-2. Epub 2024 Jul 7.
4
Continuum Models of Collective Cell Migration.连续统模型的集体细胞迁移。
Adv Exp Med Biol. 2019;1146:45-66. doi: 10.1007/978-3-030-17593-1_4.
5
Triangles bridge the scales: Quantifying cellular contributions to tissue deformation.三角形连接刻度:量化细胞对组织变形的贡献。
Phys Rev E. 2017 Mar;95(3-1):032401. doi: 10.1103/PhysRevE.95.032401. Epub 2017 Mar 1.
6
Cell-level finite element studies of viscous cells in planar aggregates.平面聚集体中粘性细胞的细胞水平有限元研究。
J Biomech Eng. 2000 Aug;122(4):394-401. doi: 10.1115/1.1286563.
7
Deformation analyses in cell and developmental biology. Part I--Formal methodology.细胞与发育生物学中的变形分析。第一部分——形式方法论。
J Biomech Eng. 1987 Feb;109(1):10-7. doi: 10.1115/1.3138634.
8
Mechanosensitive Junction Remodeling Promotes Robust Epithelial Morphogenesis.机械敏感性连接重塑促进强健的上皮形态发生。
Biophys J. 2019 Nov 5;117(9):1739-1750. doi: 10.1016/j.bpj.2019.09.027. Epub 2019 Sep 28.
9
Microfilaments in cellular and developmental processes.细胞与发育过程中的微丝。
Science. 1971 Jan 15;171(3967):135-43. doi: 10.1126/science.171.3967.135.
10
From cells to tissue: A continuum model of epithelial mechanics.从细胞到组织:上皮力学的连续统模型。
Phys Rev E. 2017 Aug;96(2-1):022418. doi: 10.1103/PhysRevE.96.022418. Epub 2017 Aug 31.

引用本文的文献

1
Balancing competing effects of tissue growth and cytoskeletal regulation during Drosophila wing disc development.在果蝇翅膀发育过程中平衡组织生长和细胞骨架调节的竞争效应。
Nat Commun. 2024 Mar 20;15(1):2477. doi: 10.1038/s41467-024-46698-7.
2
SEM: Introducing mechanics in cell and tissue modeling using coarse-grained homogeneous particle dynamics.扫描电子显微镜:使用粗粒度均匀粒子动力学在细胞和组织建模中引入力学。
APL Bioeng. 2023 Dec 5;7(4):046118. doi: 10.1063/5.0166829. eCollection 2023 Dec.
3
Combined computational modeling and experimental analysis integrating chemical and mechanical signals suggests possible mechanism of shoot meristem maintenance.
结合化学和机械信号的计算建模和实验分析表明,茎分生组织维持的可能机制。
PLoS Comput Biol. 2022 Jun 21;18(6):e1010199. doi: 10.1371/journal.pcbi.1010199. eCollection 2022 Jun.
4
Quantitative modeling identifies critical cell mechanics driving bile duct lumen formation.定量建模确定了驱动胆管管腔形成的关键细胞力学。
PLoS Comput Biol. 2022 Feb 18;18(2):e1009653. doi: 10.1371/journal.pcbi.1009653. eCollection 2022 Feb.
5
Epithelial organ shape is generated by patterned actomyosin contractility and maintained by the extracellular matrix.上皮器官的形状是通过模式化的肌动球蛋白收缩产生的,并由细胞外基质维持。
PLoS Comput Biol. 2020 Aug 20;16(8):e1008105. doi: 10.1371/journal.pcbi.1008105. eCollection 2020 Aug.
6
Ionizing Radiation and Complex DNA Damage: Quantifying the Radiobiological Damage Using Monte Carlo Simulations.电离辐射与复杂DNA损伤:使用蒙特卡罗模拟量化放射生物学损伤
Cancers (Basel). 2020 Mar 26;12(4):799. doi: 10.3390/cancers12040799.
7
Cell-substrate mechanics guide collective cell migration through intercellular adhesion: a dynamic finite element cellular model.细胞-基质力学通过细胞间黏附指导细胞集体迁移:一个动态有限元细胞模型。
Biomech Model Mechanobiol. 2020 Oct;19(5):1781-1796. doi: 10.1007/s10237-020-01308-5. Epub 2020 Feb 27.
8
How and why to build a mathematical model: A case study using prion aggregation.如何以及为何构建数学模型:使用朊病毒聚集的案例研究。
J Biol Chem. 2020 Apr 10;295(15):5022-5035. doi: 10.1074/jbc.REV119.009851. Epub 2020 Jan 31.
9
A quantitative high-resolution computational mechanics cell model for growing and regenerating tissues.用于生长和再生组织的定量高分辨率计算力学细胞模型。
Biomech Model Mechanobiol. 2020 Feb;19(1):189-220. doi: 10.1007/s10237-019-01204-7. Epub 2019 Nov 20.
10
A one-dimensional individual-based mechanical model of cell movement in heterogeneous tissues and its coarse-grained approximation.异质组织中基于个体的细胞运动一维力学模型及其粗粒化近似
Proc Math Phys Eng Sci. 2019 Jul;475(2227):20180838. doi: 10.1098/rspa.2018.0838. Epub 2019 Jul 24.