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亚砷酸盐抑制黄嘌呤氧化酶的 X 射线晶体结构:活性位点中亚钼和砷之间的μ-硫代,μ-氧双重桥。

X-ray crystal structure of arsenite-inhibited xanthine oxidase: μ-sulfido,μ-oxo double bridge between molybdenum and arsenic in the active site.

机构信息

Department of Biochemistry, University of California, Riverside, 1463 Boyce Hall, Riverside, California 92521, United States.

出版信息

J Am Chem Soc. 2011 Aug 17;133(32):12414-7. doi: 10.1021/ja2050265. Epub 2011 Jul 21.

Abstract

Xanthine oxidoreductase is a molybdenum-containing enzyme that catalyzes the hydroxylation reaction of sp(2)-hybridized carbon centers of a variety of substrates, including purines, aldehydes, and other heterocyclic compounds. The complex of arsenite-inhibited xanthine oxidase has been characterized previously by UV-vis, electron paramagnetic resonance, and X-ray absorption spectroscopy (XAS), and the catalytically essential sulfido ligand of the square-pyrimidal molybdenum center has been suggested to be involved in arsenite binding through either a μ-sulfido,μ-oxo double bridge or a single μ-sulfido bridge. However, this is contrary to the crystallographically observed single μ-oxo bridge between molybdenum and arsenic in the desulfo form of aldehyde oxidoreductase from Desulfovibrio gigas (an enzyme closely related to xanthine oxidase), whose molybdenum center has an oxo ligand replacing the catalytically essential sulfur, as seen in the functional form of xanthine oxidase. Here we use X-ray crystallography to characterize the molybdenum center of arsenite-inhibited xanthine oxidase and solve the structures of the oxidized and reduced inhibition complexes at 1.82 and 2.11 Å resolution, respectively. We observe μ-sulfido,μ-oxo double bridges between molybdenum and arsenic in the active sites of both complexes. Arsenic is four-coordinate with a distorted trigonal-pyramidal geometry in the oxidized complex and three-coordinate with a distorted trigonal-planar geometry in the reduced complex. The doubly bridged binding mode is in agreement with previous XAS data indicating that the catalytically essential sulfur is also essential for the high affinity of reduced xanthine oxidoreductase for arsenite.

摘要

黄嘌呤氧化还原酶是一种含钼酶,它催化各种底物 sp(2)-杂化碳原子的羟化反应,包括嘌呤、醛和其他杂环化合物。先前通过紫外可见光谱、电子顺磁共振和 X 射线吸收光谱(XAS)对亚砷酸盐抑制的黄嘌呤氧化还原酶复合物进行了表征,并提出了位于方锥形钼中心的催化必需的硫化物配体通过μ-硫代、μ-氧双桥或单个μ-硫代桥与亚砷酸盐结合。然而,这与在来自巨脱硫弧菌的脱磺醛氧化还原酶(一种与黄嘌呤氧化还原酶密切相关的酶)的脱磺形式中观察到的钼和砷之间的单个μ-氧桥相矛盾,该酶的钼中心具有取代催化必需硫的氧配体,就像在黄嘌呤氧化还原酶的功能形式中一样。在这里,我们使用 X 射线晶体学来表征亚砷酸盐抑制的黄嘌呤氧化还原酶的钼中心,并分别在 1.82 和 2.11 Å 分辨率下解决了氧化和还原抑制复合物的结构。我们在两个复合物的活性部位都观察到钼和砷之间的μ-硫代、μ-氧双桥。在氧化复合物中,砷呈四配位,具有扭曲的三角双锥几何形状,在还原复合物中,砷呈三配位,具有扭曲的三角平面几何形状。双桥键合方式与先前的 XAS 数据一致,表明催化必需的硫对还原型黄嘌呤氧化还原酶与亚砷酸盐的高亲和力也是必需的。

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