Armas Cayarga Anny, Perea Hernández Yenitse, González González Yaimé J, Dueñas Carrera Santiago, González Pérez Idania, Robaina Álvarez René
Molecular Biology Department, Centro de InmunoEnsayo (CIE), Calle 134 y Avenida 25 Playa, Apartado Postal 6653, Ciudad de la Habana, CP 11600, Cuba.
Biotechnol Res Int. 2011;2011:964831. doi: 10.4061/2011/964831. Epub 2011 Jun 23.
Human immunodeficiency virus type-1 (HIV-1) viral load is useful for monitoring disease progression in HIV-infected individuals. We generated RNA standards of HIV-1 and internal control (IC) by in vitro transcription and evaluated its performance in a quantitative reverse transcription polymerase chain reaction (qRT-PCR) assay. HIV-1 and IC standards were obtained at high RNA concentrations, without DNA contamination. When these transcripts were included as standards in a qRT-PCR assay, it was obtained a good accuracy (±0.5 log(10) unit of the expected results) in the quantification of the HIV-1 RNA international standard and controls. The lower limit detection achieved using these standards was 511.0 IU/mL. A high correlation (r = 0.925) was obtained between the in-house qRT-PCR assay and the NucliSens easyQ HIV-1 test (bioMerieux) for HIV-1 RNA quantitation with clinical samples (N = 14). HIV-1 and IC RNA transcripts, generated in this study, proved to be useful as standards in an in-house qRT-PCR assay for determination of HIV-1 viral load.
1型人类免疫缺陷病毒(HIV-1)载量对于监测HIV感染个体的疾病进展很有用。我们通过体外转录生成了HIV-1和内对照(IC)的RNA标准品,并在定量逆转录聚合酶链反应(qRT-PCR)测定中评估了其性能。HIV-1和IC标准品在高RNA浓度下获得,无DNA污染。当将这些转录本作为标准品纳入qRT-PCR测定时,在HIV-1 RNA国际标准品和对照品的定量中获得了良好的准确性(±0.5 log(10)个预期结果单位)。使用这些标准品实现的检测下限为511.0 IU/mL。对于临床样本(N = 14)的HIV-1 RNA定量,内部qRT-PCR测定与NucliSens easyQ HIV-1检测(生物梅里埃公司)之间获得了高度相关性(r = 0.925)。本研究中生成的HIV-1和IC RNA转录本被证明可作为内部qRT-PCR测定中用于测定HIV-1病毒载量的标准品。