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使用Nuclisens EasyQ检测法(版本1.1)对血浆中2型人类免疫缺陷病毒A亚型RNA进行定量检测。

Quantitative detection of plasma human immunodeficiency virus type 2 subtype A RNA by the Nuclisens EasyQ Assay (version 1.1).

作者信息

Rodés Berta, Sheldon Julie, Toro Carlos, Cuevas Laureano, Pérez-Pastrana Esperanza, Herrera Inmaculada, Soriano Vincent

机构信息

Department of Infectious Diseases, Hospital Carlos III, Sinesio Delgado, 10, Madrid 28029, Spain.

出版信息

J Clin Microbiol. 2007 Jan;45(1):88-92. doi: 10.1128/JCM.01613-06. Epub 2006 Nov 8.

DOI:10.1128/JCM.01613-06
PMID:17093034
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1828987/
Abstract

No commercial viral load assay has yet been approved for use for measurement of human immunodeficiency virus type 2 (HIV-2) RNA levels in plasma. We assessed the performance of the NucliSens EasyQ (version 1.1) assay (EasyQ; bioMérieux, Boxtel, The Netherlands) to quantify HIV-2 viremia. A viral stock was prepared from an HIV-2 (subtype A)-infected patient. Culture supernatant was subjected to viral particle counting by electron microscopy. Serial dilutions of the viral stock were made in HIV-negative plasma and were used to test EasyQ for its sensitivity, linearity, and reproducibility. RNA was quantified by the NucliSens EasyQ (version 1.1) assay. Plasma samples from 75 HIV-2-infected patients were further tested. EasyQ was able to quantify HIV-2 RNA in a reproducible manner. Overall, estimates of the number of HIV-2 RNA copies/ml obtained with EasyQ were lower than those obtained by electron microscopy; however, the differences were always less than 0.7 log (mean, 0.55 +/- 0.19 log(10)). The assay showed good linearity (r(2) = 0.964; P < 0.0001). The agreement between both measures was assessed by use of a Bland-Altman plot; the narrow limits (0.158 to 0.952), defined as the mean difference +/- 2 standard deviations, indicated good agreement. The reproducibility was also good, since the between-run coefficients of variation were 1.49, 3.60, and 12.25% for samples containing 6.30, 4.30, and 2.30 log(10) HIV-2 RNA copies/ml, respectively. HIV-2 RNA was detected in 34 of 75 (45%) plasma specimens (mean, 2.72 log RNA copies/ml; range, 1.74 to 4.11 log RNA copies/ml); the rest of the specimens were considered to have undetectable viremia. A negative correlation was found between the number of HIV-2 RNA copies/ml and CD4 counts. In summary, EasyQ was shown to be reliable for the measurement of plasma HIV-2 subtype A RNA levels and may be a feasible tool for routine clinical monitoring of HIV-2 subtype A-infected patients.

摘要

尚无用于检测血浆中人类免疫缺陷病毒2型(HIV-2)RNA水平的商用病毒载量检测方法获得批准。我们评估了NucliSens EasyQ(1.1版)检测方法(EasyQ;法国生物梅里埃公司,荷兰博克斯泰尔)对HIV-2病毒血症进行定量的性能。从一名感染HIV-2(A亚型)的患者制备病毒储备液。通过电子显微镜对培养上清液进行病毒颗粒计数。将病毒储备液在HIV阴性血浆中进行系列稀释,并用于检测EasyQ的灵敏度、线性和重复性。通过NucliSens EasyQ(1.1版)检测方法对RNA进行定量。对75名感染HIV-2的患者的血浆样本进行了进一步检测。EasyQ能够以可重复的方式对HIV-2 RNA进行定量。总体而言,通过EasyQ获得的每毫升HIV-2 RNA拷贝数估计值低于通过电子显微镜获得的估计值;然而,差异始终小于0.7对数(平均值,0.55±0.19对数(10))。该检测方法显示出良好的线性(r² = 0.964;P < 0.0001)。通过Bland-Altman图评估两种测量方法之间的一致性;定义为平均差异±2个标准差的狭窄界限(0.158至0.952)表明一致性良好。重复性也很好,因为对于每毫升分别含有6.30、4.30和2.30对数(10)HIV-2 RNA拷贝的样本,批间变异系数分别为1.49%、3.60%和12.25%。在75份血浆标本中有34份(45%)检测到HIV-2 RNA(平均值,2.72对数RNA拷贝/毫升;范围,1.74至4.11对数RNA拷贝/毫升);其余标本被认为病毒血症检测不到。发现每毫升HIV-2 RNA拷贝数与CD4细胞计数之间呈负相关。总之,EasyQ被证明对于检测血浆中HIV-2 A亚型RNA水平是可靠的,并且可能是对感染HIV-2 A亚型患者进行常规临床监测的一种可行工具。