• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用Volocity高性能图像分析软件对体外样本中的人类干细胞命运进行计算机辅助二维和三维定量分析。

Computer-aided 2D and 3D quantification of human stem cell fate from in vitro samples using Volocity high performance image analysis software.

作者信息

Piltti Katja M, Haus Daniel L, Do Eileen, Perez Harvey, Anderson A J, Cummings B J

机构信息

Physical Medicine & Rehabilitation, University of California, Irvine, CA 92696-4540, USA.

出版信息

Stem Cell Res. 2011 Nov;7(3):256-63. doi: 10.1016/j.scr.2011.05.005. Epub 2011 Jun 7.

DOI:10.1016/j.scr.2011.05.005
PMID:21775237
Abstract

Accurate automated cell fate analysis of immunostained human stem cells from 2- and 3-dimensional (2D-3D) images would improve efficiency in the field of stem cell research. Development of an accurate and precise tool that reduces variability and the time needed for human stem cell fate analysis will improve productivity and interpretability of the data across research groups. In this study, we have created protocols for high performance image analysis software Volocity® to classify and quantify cytoplasmic and nuclear cell fate markers from 2D-3D images of human neural stem cells after in vitro differentiation. To enhance 3D image capture efficiency, we optimized the image acquisition settings of an Olympus FV10i® confocal laser scanning microscope to match our quantification protocols and improve cell fate classification. The methods developed in this study will allow for a more time efficient and accurate software based, operator validated, stem cell fate classification and quantification from 2D and 3D images, and yield the highest ≥94.4% correspondence with human recognized objects.

摘要

对来自二维和三维(2D - 3D)图像的免疫染色人类干细胞进行准确的自动细胞命运分析,将提高干细胞研究领域的效率。开发一种准确且精确的工具,减少人类干细胞命运分析所需的变异性和时间,将提高各研究团队数据的生产力和可解释性。在本研究中,我们为高性能图像分析软件Volocity®创建了协议,用于对体外分化后的人类神经干细胞的二维和三维图像中的细胞质和细胞核细胞命运标记物进行分类和定量。为提高三维图像捕获效率,我们优化了奥林巴斯FV10i®共聚焦激光扫描显微镜的图像采集设置,以匹配我们的定量协议并改善细胞命运分类。本研究中开发的方法将实现更高效、准确的基于软件且经过操作员验证的二维和三维图像干细胞命运分类与定量,并且与人类识别的对象具有≥94.4%的最高对应率。

相似文献

1
Computer-aided 2D and 3D quantification of human stem cell fate from in vitro samples using Volocity high performance image analysis software.使用Volocity高性能图像分析软件对体外样本中的人类干细胞命运进行计算机辅助二维和三维定量分析。
Stem Cell Res. 2011 Nov;7(3):256-63. doi: 10.1016/j.scr.2011.05.005. Epub 2011 Jun 7.
2
An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images.一种可对三维荧光图像中的细胞形态变化进行量化的分析工具。
J Vis Exp. 2012 Aug 31(66):e4233. doi: 10.3791/4233.
3
Visualization and correction of automated segmentation, tracking and lineaging from 5-D stem cell image sequences.5D干细胞图像序列自动分割、追踪及谱系分析的可视化与校正
BMC Bioinformatics. 2014 Oct 3;15(1):328. doi: 10.1186/1471-2105-15-328.
4
[Confocal microscopy: a tool to visualise differentiation of stem cells into cardiomyocytes].[共聚焦显微镜:一种可视化干细胞向心肌细胞分化的工具]
J Soc Biol. 2004;198(2):145-51.
5
3D-DIASemb: a computer-assisted system for reconstructing and motion analyzing in 4D every cell and nucleus in a developing embryo.3D-DIASemb:一种用于对发育胚胎中的每个细胞和细胞核进行四维重建和运动分析的计算机辅助系统。
Dev Biol. 2002 May 15;245(2):329-47. doi: 10.1006/dbio.2002.0631.
6
Quantification and its applications in fluorescent microscopy imaging.荧光显微镜成像中的定量分析及其应用。
Traffic. 2009 Aug;10(8):951-61. doi: 10.1111/j.1600-0854.2009.00938.x. Epub 2009 May 5.
7
A protocol to analyse cellular dynamics during plant development.一种分析植物发育过程中细胞动态的方案。
Plant J. 2005 Dec;44(6):1045-53. doi: 10.1111/j.1365-313X.2005.02576.x.
8
Parsing Stem Cell Lineage Development Using High Content Image Analysis of Epigenetic Spatial Markers.利用表观遗传空间标记的高内涵图像分析解析干细胞谱系发育
Curr Protoc Stem Cell Biol. 2018 Aug;46(1):e54. doi: 10.1002/cpsc.54. Epub 2018 Jun 14.
9
A rapid and efficient 2D/3D nuclear segmentation method for analysis of early mouse embryo and stem cell image data.一种快速有效的二维/三维核分割方法,用于分析早期小鼠胚胎和干细胞图像数据。
Stem Cell Reports. 2014 Mar 11;2(3):382-97. doi: 10.1016/j.stemcr.2014.01.010.
10
Computer-assisted estimation in the CNS of 3D multimarker 'overlap' or 'touch' at the level of individual nerve endings: a confocal laser scanning microscope application.计算机辅助估计中枢神经系统中单个神经末梢水平的三维多标记“重叠”或“接触”:共聚焦激光扫描显微镜应用
J Neurosci Res. 2007 May 1;85(6):1215-28. doi: 10.1002/jnr.21244.

引用本文的文献

1
From morphology to single-cell molecules: high-resolution 3D histology in biomedicine.从形态学到单细胞分子:生物医学中的高分辨率三维组织学
Mol Cancer. 2025 Mar 3;24(1):63. doi: 10.1186/s12943-025-02240-x.
2
Live-cell time-lapse imaging and single-cell tracking of in vitro cultured neural stem cells - Tools for analyzing dynamics of cell cycle, migration, and lineage selection.体外培养神经干细胞的活细胞延时成像和单细胞跟踪——分析细胞周期、迁移和谱系选择动态的工具。
Methods. 2018 Jan 15;133:81-90. doi: 10.1016/j.ymeth.2017.10.003. Epub 2017 Oct 16.
3
Neutrophils Induce Astroglial Differentiation and Migration of Human Neural Stem Cells via C1q and C3a Synthesis.
中性粒细胞通过C1q和C3a的合成诱导人神经干细胞的星形胶质细胞分化和迁移。
J Immunol. 2017 Aug 1;199(3):1069-1085. doi: 10.4049/jimmunol.1600064. Epub 2017 Jul 7.
4
CD133-enriched Xeno-Free human embryonic-derived neural stem cells expand rapidly in culture and do not form teratomas in immunodeficient mice.富含CD133的无动物源人胚胎衍生神经干细胞在培养中迅速扩增,且在免疫缺陷小鼠中不形成畸胎瘤。
Stem Cell Res. 2014 Sep;13(2):214-26. doi: 10.1016/j.scr.2014.06.008. Epub 2014 Jul 10.
5
Immunosuppressants affect human neural stem cells in vitro but not in an in vivo model of spinal cord injury.免疫抑制剂在体外影响人神经干细胞,但不在脊髓损伤的体内模型中。
Stem Cells Transl Med. 2013 Oct;2(10):731-44. doi: 10.5966/sctm.2012-0175. Epub 2013 Aug 27.