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通过氢核磁共振(¹H NMR)和氙-129核磁共振(¹²⁹Xe NMR)以及分子动力学模拟对重组人肌红蛋白异构体进行结构表征

Structural characterization of recombinant human myoglobin isoforms by (1)H and (129)Xe NMR and molecular dynamics simulations.

作者信息

Gussoni Maristella, Scorciapino Mariano Andrea, Vezzoli Alessandra, Anedda Roberto, Greco Fulvia, Ceccarelli Matteo, Casu Mariano

机构信息

Università di Milano, Dipartimento di Scienze e Tecnologie Biomediche, Italy.

出版信息

Biochim Biophys Acta. 2011 Dec;1814(12):1919-29. doi: 10.1016/j.bbapap.2011.06.014. Epub 2011 Jul 13.

Abstract

Myoglobin (Mb), the main cytosolic oxygen storage/deliver protein, is also known to interact with different small ligands exerting other fundamental physiological roles. In Humans up to five different Mb isoforms are present. The two most expressed ones (>90%) differ only at the 54th position, K54 (Mb-I) and E54 (Mb-II) respectively. High-altitude populations are characterized by a higher Mb concentration in skeletal muscle, totally attributable to Mb-II, as well as a higher efficiency of locomotion, leading to the hypothesis of a cause-effect relationship with the evolutionary response to the high-altitude hypoxic environment. In this work, a first structural characterization of the two more expressed human Mb isoforms has been carried out. In particular, a detailed (1)H and (129)Xe NMR study was aimed to characterize the structure of the hydrophobic cavities around the heme group. Experimental results have been compared to those from MD simulations, i.e. volume fluctuations and occurrence. Electronic structure of the heme ring ground state resulted to be comparable for the two investigated isoforms, despite the single point mutation at position 54. However, the use of (129)Xe as a probe revealed small but significant modifications in the structure of internal cavities. MD simulations supported NMR results indicating interesting structural/dynamical differences in the average volume and occurrence of the main cavities lining Mb prosthetic group.

摘要

肌红蛋白(Mb)是主要的胞质内氧储存/传递蛋白,已知它还能与不同的小配体相互作用,发挥其他重要的生理作用。人类体内存在多达五种不同的Mb同工型。其中表达量最高的两种同工型(>90%)仅在第54位有所不同,分别为K54(Mb-I)和E54(Mb-II)。高海拔人群的特征是骨骼肌中Mb浓度较高,这完全归因于Mb-II,同时其运动效率也更高,这导致了一种假设,即与对高海拔缺氧环境的进化反应存在因果关系。在这项工作中,对两种表达量较高的人类Mb同工型进行了首次结构表征。具体而言,一项详细的(1)H和(129)Xe核磁共振研究旨在表征血红素基团周围疏水腔的结构。实验结果已与分子动力学模拟结果进行了比较,即体积波动和出现情况。尽管在第54位存在单点突变,但两种研究的同工型血红素环基态的电子结构结果相当。然而,使用(129)Xe作为探针揭示了内腔结构的微小但显著的变化。分子动力学模拟支持了核磁共振结果,表明在Mb辅基内衬主要腔的平均体积和出现情况方面存在有趣的结构/动力学差异。

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