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斯氏鞘氨醇单胞菌耐锑亚种,一种从煤矿土壤中分离到的高度耐锑细菌,及对鞘氨醇单胞菌属的描述修订。

Skermanella stibiiresistens sp. nov., a highly antimony-resistant bacterium isolated from coal-mining soil, and emended description of the genus Skermanella.

机构信息

State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, PR China.

出版信息

Int J Syst Evol Microbiol. 2012 Jun;62(Pt 6):1271-1276. doi: 10.1099/ijs.0.033746-0. Epub 2011 Jul 22.

Abstract

A Gram-negative, aerobic, motile, rod-shaped, antimony-resistant bacterium, designated strain SB22(T), was isolated from soil of Jixi coal mine, China. The major cellular fatty acids (>5 %) were C(18:1)ω7c (63.5 %), summed feature 2 (C(14:0) 3-OH and/or iso-C(16:1) I, 10.8 %) and C(16:0) (9.9 %). The major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and an unknown aminolipid. The genomic DNA G+C content was 69.6 mol% and Q-10 was the major respiratory quinone. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain SB22(T) was most closely related to Skermanella aerolata 5416T-32(T) (97.3 %), Skermanella parooensis ACM 2042(T) (95.8 %) and Skermanella xinjiangensis 10-1-101(T) (92.9 %). The DNA-DNA hybridization value between strain SB22(T) and S. aerolata KACC 11604(T) ( = 5416T-32(T)) was 43.3 %. On the basis of phenotypic, chemotaxonomic and phylogenetic characteristics of strain SB22(T) and related species, it is considered that the isolate represents a novel species of the genus Skermanella, for which the name Skermanella stibiiresistens sp. nov. is proposed. The type strain is SB22(T) ( = CGMCC 1.10751(T) = KCTC 23364(T)). An emended description of the genus Skermanella is provided.

摘要

一株革兰氏阴性、需氧、能动、杆状、耐锑细菌,被命名为 SB22(T) 菌株,从中国绩溪煤矿的土壤中分离得到。主要的细胞脂肪酸 (>5 %)为 C(18:1)ω7c (63.5 %)、特征 2 总和 (C(14:0) 3-OH 和/或 iso-C(16:1) I,10.8 %) 和 C(16:0) (9.9 %)。主要的极性脂为双磷脂酰甘油、磷脂酰胆碱、磷脂酰乙醇胺、磷脂酰甘油和一种未知的氨基脂。基因组 DNA G+C 含量为 69.6 mol%,Q-10 为主要的呼吸醌。基于 16S rRNA 基因序列的系统发育分析表明,菌株 SB22(T) 与 Skermanella aerolata 5416T-32(T) (97.3 %)、Skermanella parooensis ACM 2042(T) (95.8 %)和 Skermanella xinjiangensis 10-1-101(T) (92.9 %)最为密切相关。菌株 SB22(T) 与 Skermanella aerolata KACC 11604(T) ( = 5416T-32(T))之间的 DNA-DNA 杂交值为 43.3 %。根据 SB22(T) 菌株和相关种的表型、化学分类和系统发育特征,认为该分离株代表了 Skermanella 属的一个新种,建议将其命名为 Skermanella stibiiresistens sp. nov.。其模式菌株为 SB22(T) ( = CGMCC 1.10751(T) = KCTC 23364(T))。对 Skermanella 属进行了修订描述。

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