Tahon Guillaume, Tytgat Bjorn, Willems Anne
Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University Ghent, Belgium.
Front Microbiol. 2016 Dec 19;7:2026. doi: 10.3389/fmicb.2016.02026. eCollection 2016.
Microbial life in exposed terrestrial surface layers in continental Antarctica is faced with extreme environmental conditions, including scarcity of organic matter. Bacteria in these exposed settings can therefore be expected to use alternative energy sources such as solar energy, abundant during the austral summer. Using Illumina MiSeq sequencing, we assessed the diversity and abundance of four conserved protein encoding genes involved in different key steps of light-harvesting pathways dependent on (bacterio)chlorophyll (/, and genes) and rhodopsins (actinorhodopsin genes), in exposed soils from the Sør Rondane Mountains, East Antarctica. Analysis of genes, encoding a subunit of the type 2 photochemical reaction center found in anoxygenic phototrophic bacteria, revealed a broad diversity, dominated by - and -like sequences. The and , involved in (bacterio)chlorophyll synthesis, on the other hand, showed a high relative abundance of either cyanobacterial or green algal trebouxiophyceael reads, depending on the sample, while most sequences belonged mostly to previously unidentified phylotypes. Rhodopsin-containing phototrophic bacteria could not be detected in the samples. Our results, while suggesting that Cyanobacteria and green algae are the main phototrophic groups, show that light-harvesting bacteria are nevertheless very diverse in microbial communities in Antarctic soils.
南极大陆暴露的陆地表层中的微生物生命面临着极端环境条件,包括有机物稀缺。因此,可以预期这些暴露环境中的细菌会利用替代能源,如在南极夏季丰富的太阳能。我们使用Illumina MiSeq测序技术,评估了来自东南极索伦山脉暴露土壤中,参与依赖于(细菌)叶绿素(/、和基因)和视紫红质(肌动视紫红质基因)的光捕获途径不同关键步骤的四个保守蛋白质编码基因的多样性和丰度。对编码在无氧光合细菌中发现的2型光化学反应中心亚基的基因进行分析,发现其具有广泛的多样性,以 - 和 - 样序列为主。另一方面,参与(细菌)叶绿素合成的和,根据样本不同,显示出蓝藻或绿藻小球藻纲读数的相对丰度较高,而大多数序列大多属于以前未鉴定的系统发育型。在样本中未检测到含视紫红质的光合细菌。我们的结果虽然表明蓝藻和绿藻是主要的光合类群,但表明在南极土壤的微生物群落中,光捕获细菌仍然非常多样。