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从熔体中苯的均相成核的计算机模拟。

Computer simulations of homogeneous nucleation of benzene from the melt.

机构信息

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.

出版信息

J Phys Chem B. 2011 Sep 8;115(35):10400-12. doi: 10.1021/jp203550t. Epub 2011 Aug 12.

Abstract

Nucleation is the key step in crystallization by which the molecules (or atoms or ions) aggregate together, find the right relative orientations, and start to grow to form the final crystal structure. Since nucleation is an activated step involving a large gap in time scales between molecular motions and the nucleation event itself, nucleation must be studied using rare events methods. We employ a technique developed previously in our group known as aimless shooting [Peters, B.; Trout, B. L. J. Chem. Phys., 2006, 125, 054108], which is based on transition path sampling, to generate reactive trajectories between the disordered and ordered phases of benzene. Using the likelihood maximization algorithm, we analyze the aimless shooting trajectories to identify the key order parameters or collective variables to describe the reaction coordinate for the nucleation of benzene from the melt. We find that the local bond orientation and local relative orientation order parameters are the most important collective variables in describing the reaction coordinate for homogeneous nucleation from the melt, as compared to cluster size and space-averaged order parameters. This study also demonstrates the utility of recently developed order parameters for molecular crystals [Santiso, E. E.; Trout, B. L. J. Chem. Phys., 2011, 134, 064109].

摘要

成核是结晶的关键步骤,通过该步骤,分子(或原子或离子)聚集在一起,找到合适的相对取向,并开始生长以形成最终的晶体结构。由于成核是一个涉及分子运动和成核事件本身之间时间尺度上的巨大差距的激活步骤,因此必须使用稀有事件方法研究成核。我们采用了我们小组先前开发的一种称为无目的射击的技术[Peters,B.; Trout,B. L. J. Chem. Phys.,2006,125,054108],该技术基于跃迁路径采样,在苯的无序相和有序相之间生成反应轨迹。使用似然最大化算法,我们分析无目的射击轨迹,以确定关键的序参数或集体变量,以描述从熔体中生成苯的成核反应坐标。我们发现,与簇大小和空间平均序参数相比,局部键取向和局部相对取向序参数是描述从熔体中均匀成核的反应坐标的最重要的集体变量。这项研究还展示了最近为分子晶体开发的序参数的实用性[Santiso,E. E.; Trout,B. L. J. Chem. Phys.,2011,134,064109]。

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