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分子动力学在晶体成核研究中的应用

Metadynamics studies of crystal nucleation.

机构信息

Department of Chemistry and Applied Biosciences, ETH Zurich, CH-8092 Zurich, Switzerland.

Department of Chemistry and Applied Biosciences, ETH Zurich, CH-8092 Zurich, Switzerland ; Facoltá di informatica, Istituto di Scienze Computazionali, Universitá della Svizzera Italiana, CH-6900 Lugano, Switzerland ; ETH Zurich, Institute of Process Engineering, Soneggstrasse 3, CH-8092 Zurich, Switzerland.

出版信息

IUCrJ. 2015 Feb 10;2(Pt 2):256-66. doi: 10.1107/S2052252514027626. eCollection 2015 Mar 1.

Abstract

Crystallization processes are characterized by activated events and long timescales. These characteristics prevent standard molecular dynamics techniques from being efficiently used for the direct investigation of processes such as nucleation. This short review provides an overview on the use of metadynamics, a state-of-the-art enhanced sampling technique, for the simulation of phase transitions involving the production of a crystalline solid. In particular the principles of metadynamics are outlined, several order parameters are described that have been or could be used in conjunction with metadynamics to sample nucleation events and then an overview is given of recent metadynamics results in the field of crystal nucleation.

摘要

结晶过程的特点是激活事件和长时间尺度。这些特点使得标准的分子动力学技术无法有效地用于直接研究成核等过程。这篇简短的综述概述了元动力学(一种最先进的增强采样技术)在模拟涉及产生晶体固体的相变中的应用。特别概述了元动力学的原理,描述了几个序参量,这些参量已经或可以与元动力学一起用于采样成核事件,然后概述了结晶成核领域的最近的元动力学结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a53/4392418/9f3026c4f186/m-02-00256-fig1.jpg

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