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本文引用的文献

1
Bridging the text-image gap: a decision support tool for real-time PACS browsing.弥合文本-图像差距:用于实时 PACS 浏览的决策支持工具。
J Digit Imaging. 2012 Apr;25(2):227-39. doi: 10.1007/s10278-011-9414-x.
2
Anaphoric relations in the clinical narrative: corpus creation.临床叙述中的回指关系:语料库创建。
J Am Med Inform Assoc. 2011 Jul-Aug;18(4):459-65. doi: 10.1136/amiajnl-2011-000108. Epub 2011 Apr 1.
3
Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications.梅奥临床文本分析和知识提取系统(cTAKES):架构、组件评估和应用。
J Am Med Inform Assoc. 2010 Sep-Oct;17(5):507-13. doi: 10.1136/jamia.2009.001560.
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Customization of medical report data.医学报告数据的定制
J Digit Imaging. 2010 Aug;23(4):363-73. doi: 10.1007/s10278-010-9307-4.
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An overview of MetaMap: historical perspective and recent advances.MetaMap 概述:历史视角与最新进展。
J Am Med Inform Assoc. 2010 May-Jun;17(3):229-36. doi: 10.1136/jamia.2009.002733.
6
Uncovering and improving upon the inherent deficiencies of radiology reporting through data mining.通过数据挖掘发现并改进放射学报告中的固有缺陷。
J Digit Imaging. 2010 Apr;23(2):109-18. doi: 10.1007/s10278-010-9279-4.
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The challenges, opportunities, and imperative of structured reporting in medical imaging.医学影像结构化报告的挑战、机遇和必要性。
J Digit Imaging. 2009 Dec;22(6):562-8. doi: 10.1007/s10278-009-9239-z.
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Use of semantic features to classify patient smoking status.利用语义特征对患者吸烟状况进行分类。
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The radiology report of the future: a summary of the 2007 Intersociety Conference.未来的放射学报告:2007年跨学会会议总结
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使用 MedLEE 自动关联放射学报告中的临床发现和身体部位。

Automatically correlating clinical findings and body locations in radiology reports using MedLEE.

机构信息

Philips Research Europe, Prof. Holstlaan 4, 5656AA, Eindhoven, the Netherlands.

出版信息

J Digit Imaging. 2012 Apr;25(2):240-9. doi: 10.1007/s10278-011-9411-0.

DOI:10.1007/s10278-011-9411-0
PMID:21796490
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3295967/
Abstract

In this paper, we describe and evaluate a system that extracts clinical findings and body locations from radiology reports and correlates them. The system uses Medical Language Extraction and Encoding System (MedLEE) to map the reports' free text to structured semantic representations of their content. A lightweight reasoning engine extracts the clinical findings and body locations from MedLEE's semantic representation and correlates them. Our study is illustrative for research in which existing natural language processing software is embedded in a larger system. We manually created a standard reference based on a corpus of neuro and breast radiology reports. The standard reference was used to evaluate the precision and recall of the proposed system and its modules. Our results indicate that the precision of our system is considerably better than its recall (82.32-91.37% vs. 35.67-45.91%). We conducted an error analysis and discuss here the practical usability of the system given its recall and precision performance.

摘要

在本文中,我们描述并评估了一个从放射学报告中提取临床发现和身体部位并对其进行关联的系统。该系统使用医学语言提取和编码系统 (MedLEE) 将报告的自由文本映射到其内容的结构化语义表示。一个轻量级推理引擎从 MedLEE 的语义表示中提取临床发现和身体部位,并对其进行关联。我们的研究对于将现有自然语言处理软件嵌入更大系统的研究具有说明性。我们基于神经和乳房放射学报告语料库手动创建了一个标准参考。该标准参考用于评估所提出的系统及其模块的精度和召回率。我们的结果表明,我们系统的精度明显优于其召回率(82.32-91.37% 对 35.67-45.91%)。我们进行了错误分析,并在此讨论了给定其召回率和精度性能的系统的实际可用性。