Institute of Tumor Research and Molecular Biology, Philipps University, Marburg, Germany.
PLoS Genet. 2011 Jul;7(7):e1002206. doi: 10.1371/journal.pgen.1002206. Epub 2011 Jul 28.
Eukaryotic cells respond to genomic and environmental stresses, such as DNA damage and heat shock (HS), with the synthesis of poly-[ADP-ribose] (PAR) at specific chromatin regions, such as DNA breaks or HS genes, by PAR polymerases (PARP). Little is known about the role of this modification during cellular stress responses. We show here that the nucleosome remodeler dMi-2 is recruited to active HS genes in a PARP-dependent manner. dMi-2 binds PAR suggesting that this physical interaction is important for recruitment. Indeed, a dMi-2 mutant unable to bind PAR does not localise to active HS loci in vivo. We have identified several dMi-2 regions which bind PAR independently in vitro, including the chromodomains and regions near the N-terminus containing motifs rich in K and R residues. Moreover, upon HS gene activation, dMi-2 associates with nascent HS gene transcripts, and its catalytic activity is required for efficient transcription and co-transcriptional RNA processing. RNA and PAR compete for dMi-2 binding in vitro, suggesting a two step process for dMi-2 association with active HS genes: initial recruitment to the locus via PAR interaction, followed by binding to nascent RNA transcripts. We suggest that stress-induced chromatin PARylation serves to rapidly attract factors that are required for an efficient and timely transcriptional response.
真核细胞通过 PAR 聚合酶(PARP)在特定染色质区域(如 DNA 断裂或热休克基因)合成聚[ADP-核糖](PAR),以响应基因组和环境应激,如 DNA 损伤和热休克(HS)。然而,对于这种修饰在细胞应激反应中的作用知之甚少。我们在这里表明,核小体重塑酶 dMi-2 通过依赖 PARP 的方式被招募到活性 HS 基因。dMi-2 结合 PAR 表明这种物理相互作用对于招募很重要。事实上,一种不能结合 PAR 的 dMi-2 突变体不能在体内定位于活性 HS 基因座。我们已经鉴定出几个 dMi-2 区域,它们可以在体外独立结合 PAR,包括 chromodomains 和靠近包含富含 K 和 R 残基的基序的 N 末端的区域。此外,在 HS 基因激活后,dMi-2 与新生的 HS 基因转录本结合,并且其催化活性对于有效转录和共转录 RNA 加工是必需的。RNA 和 PAR 在体外竞争与 dMi-2 的结合,这表明 dMi-2 与活性 HS 基因的结合存在两步过程:通过 PAR 相互作用初始募集到基因座,然后结合新生 RNA 转录本。我们认为,应激诱导的染色质 PARylation 有助于快速吸引那些对有效和及时的转录反应所必需的因子。