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A highly accurate statistical approach for the prediction of transmembrane beta-barrels.一种用于预测跨膜β桶的高度精确的统计方法。
Bioinformatics. 2010 Aug 15;26(16):1965-74. doi: 10.1093/bioinformatics/btq308. Epub 2010 Jun 10.
3
Protein folding in membranes: insights from neutron diffraction studies of a membrane beta-sheet oligomer.膜蛋白折叠:来自膜β-折叠寡聚体中子衍射研究的见解
Biophys J. 2008 Jan 15;94(2):492-505. doi: 10.1529/biophysj.107.113183. Epub 2007 Sep 14.
4
Helical distortion in tryptophan- and lysine-anchored membrane-spanning alpha-helices as a function of hydrophobic mismatch: a solid-state deuterium NMR investigation using the geometric analysis of labeled alanines method.色氨酸和赖氨酸锚定的跨膜α螺旋中螺旋扭曲与疏水错配的关系:使用标记丙氨酸几何分析法的固态氘核磁共振研究
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Biochim Biophys Acta. 2007 Feb;1768(2):236-45. doi: 10.1016/j.bbamem.2006.10.007. Epub 2006 Oct 24.
6
Reversible unfolding of beta-sheets in membranes: a calorimetric study.膜中β-折叠片层的可逆展开:一项量热研究。
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Tilt angles of transmembrane model peptides in oriented and non-oriented lipid bilayers as determined by 2H solid-state NMR.通过2H固态核磁共振测定的跨膜模型肽在定向和非定向脂质双层中的倾斜角度。
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Analyzing heat capacity profiles of peptide-containing membranes: cluster formation of gramicidin A.分析含肽膜的热容曲线:短杆菌肽A的聚集体形成
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自组装跨膜β-折叠中的结构可塑性。

Structural plasticity in self-assembling transmembrane β-sheets.

机构信息

Department of Biochemistry, Tulane University School of Medicine, New Orleans, Louisiana, USA.

出版信息

Biophys J. 2011 Aug 17;101(4):828-36. doi: 10.1016/j.bpj.2011.06.059.

DOI:10.1016/j.bpj.2011.06.059
PMID:21843473
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3175078/
Abstract

Here we test the hypothesis that membrane-spanning β-sheets can exhibit structural plasticity in membranes due to their ability to shift hydrogen-bonding patterns. Transmembrane β-sheet forming peptides of the sequence AcWL(n), where n = 5, 6, or 7, which range from 21 to 27 Å in maximum length, were incorporated into bilayers made of phosphatidylcholine lipids with saturated acyl chains containing 14, 16, or 18 carbons, which are 36-50 Å in thickness. The effect of the peptide β-sheets on fluid- and gel-phase bilayers were studied with differential scanning calorimetry and circular dichroism spectroscopy. We show that AcWL₅ forms a stable, peptide-rich gel phase in all three lipids. The whole family of AcWL(n) peptides appears to form similarly stable, nonmembrane-disrupting β-sheets in all bilayer phases and thicknesses. Bilayers containing up to 20 mol % peptide, which is the maximum concentration tested, formed gel phases with melting temperatures that were equal to, or slightly higher than, the pure lipid transitions. Given the range of peptide lengths and bilayer thicknesses tested, these experiments show that the AcWL(n) family of membrane-inserted β-sheets exhibit remarkable structural plasticity in membranes.

摘要

在这里,我们检验了一个假设,即由于能够改变氢键模式,膜跨β-折叠在膜中可以表现出结构可塑性。我们将序列为 AcWL(n)的跨膜β-折叠形成肽(其中 n = 5、6 或 7)掺入到由具有饱和酰基链的磷脂脂质制成的双层中,这些酰基链含有 14、16 或 18 个碳原子,厚度为 36-50 Å。我们使用差示扫描量热法和圆二色性光谱研究了肽β-折叠对流体相和凝胶相双层的影响。我们表明 AcWL₅在所有三种脂质中形成稳定的、富含肽的凝胶相。AcWL(n)肽的整个家族似乎在所有双层相和厚度下都形成类似的稳定、非破坏膜的β-折叠。含有高达 20 mol%肽的双层,这是测试的最大浓度,形成的凝胶相的熔融温度与纯脂质转变相等或略高。鉴于测试的肽长度和双层厚度范围,这些实验表明,插入膜中的 AcWL(n)家族的β-折叠在膜中表现出显著的结构可塑性。